Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01059 ATGAAAAAAGTAGTCCCTCTGATCTTTTCTCAATACCTCACAATCTTTCTCATCAAATTTGCATTACTATCAGAAACTGTAATGGCAGAACCAAGGGCCAAGACAGTTTTCATAACATGTGGCAATATACTAGAGCACAACACAAGCATCTTTGTTCCAAATTTTGTTGCAACCATGGAGAAGATCAGCGAGCAGATGCGTACTACCGGCTTCGGCACAGCAGTTACAGGGACAGGACTTGATACTAACTATGGCCTAGCACAGTGTTATGGAGATCTTTCATTACTTGACTGTGTGTTGTGTTATGCTGAGGCACGCACGGTTCTTCCTCAGTGCTTCCCGTATAATTCCGGCCGCATTTACCTTGATGGTTGCTTCATGAGGTCTGAGAATTATAGTTTCTTTAATGAGTATACAGGACAAGGAGATAGAGCTTTGTGTGGGAATAGAACTAACAAGAACTTGGGTTTTCGAGCAGCAGCAAAGGAGGCAGTGCTAAGAGCAGTTCAAGGTGCACCCGAAAATAAAGGCTATGCTAGAGGGAAGGTTGATGTATCAGGAACAGCAAATGAATCTGTTTATGTTCTGGCTGATTGTTGGAGGAATTTAGACTCTAGGTCTTGCAAAGCATGTCTTGAGAAAGCATCTTCTTCGATATTGAGATGCCTGCCGGCATCAGAAGGTCGAGCGCTCAACACTGGATGCTTCATGAGGTACTCCAACAATGATTTCCTTAACAAGGAAGTGGAAAATGATAGTTCAGGAGGTAATGTATTGGTGATAGTGGTTGCAGTAGTCAGTTCGGTGATCGTCACGGTGGTTGTAGTGACTATCGGGGCATATATCTGCAAACAGAGATACATTCAAAAGAAAAGAAGAGGATCAAATGACGCAGAAAAGTTAGCCAAGACTCTTCAACATAAAAGCTTGAATTTCAAGTACTCTACATTGGAAAAAGCTACAGGATCTTTTAACGACGATAACAAGTTAGGGCACGGAGGATTTGGAACAGTTTATAAAGGAGTTTTACCTGATGGAAGACAGATTGCTATCAAGAGGTTATATTTCAACAACAGACATAGAGCAGCTGATTTCTACAATGAAGTCAACATAATTAGTGGTGTGGAACACAAGAATCTAGTTAGACTATTAGGATGCAGTTGTTCGGGACCCGAAAGCTTGCTTGTATATGAATATCTTCCCAACAGAAGTCTCGATCGCTTCATTTTTGATAAAAACAAGGGCAAAGAACTAAACTGGGAAAAGAGATATGAAATTATTATTGGGACAGCTGAAGGATTAGTTTACCTGCATGAGAACTCCAATGTCCGGATAATTCATAGAGATATAAAAGCCAGCAACATCCTATTGGATGCAAAGTTTCGAGCTAAAATTGCAGATTTTGGTTTGGCCAGATCCTTTCAAGAAGACAAGAGTCACATAAGTACAGCTATTGCAGGAACTTTAGGGTATATAGCTCCAGAGTATCTAGCACATGGTCAGTTAACAGAAAAGGCAGACGTATATAGTTTTGGAGTATTACTGCTCGAGATAGTTACCGGCAGACTGAACAACAGAAGCAAAGAATCAGAATATTCAGACAGCTTAATTATAGTGACATGGAAGCATTTTCAGTTGGGGACTGCCGAACAACTATTTGACCCAAATATCGAGTTGCACGACAATGACAACAATAGTGATGTTATTAAGAATGAGATTTTAAGAGTGATTCACATAGGACTTCTTTGCACCCAAGAGGTTCCTTCGTTACGACCAACTATGTCAAAGGCGTTACAGATGCTAAGCAAGAATGAGGAGCATCTTGATCTTGTTGCTCCCTCTAATCCACCATTCCTAGATGAGAGTACCATGGAACTCCATGATACAAATGGTGACCCATTTTATCACCTCAAGGAAAATGATTCAATAGCTACTATTTCCCATAGCTCTTTCTATGCCAGGTGA 1965 0.4066 MKKVVPLIFSQYLTIFLIKFALLSETVMAEPRAKTVFITCGNILEHNTSIFVPNFVATMEKISEQMRTTGFGTAVTGTGLDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPYNSGRIYLDGCFMRSENYSFFNEYTGQGDRALCGNRTNKNLGFRAAAKEAVLRAVQGAPENKGYARGKVDVSGTANESVYVLADCWRNLDSRSCKACLEKASSSILRCLPASEGRALNTGCFMRYSNNDFLNKEVENDSSGGNVLVIVVAVVSSVIVTVVVVTIGAYICKQRYIQKKRRGSNDAEKLAKTLQHKSLNFKYSTLEKATGSFNDDNKLGHGGFGTVYKGVLPDGRQIAIKRLYFNNRHRAADFYNEVNIISGVEHKNLVRLLGCSCSGPESLLVYEYLPNRSLDRFIFDKNKGKELNWEKRYEIIIGTAEGLVYLHENSNVRIIHRDIKASNILLDAKFRAKIADFGLARSFQEDKSHISTAIAGTLGYIAPEYLAHGQLTEKADVYSFGVLLLEIVTGRLNNRSKESEYSDSLIIVTWKHFQLGTAEQLFDPNIELHDNDNNSDVIKNEILRVIHIGLLCTQEVPSLRPTMSKALQMLSKNEEHLDLVAPSNPPFLDESTMELHDTNGDPFYHLKENDSIATISHSSFYAR 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01059 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Car08g01059 654 CDD STKc_IRAK 330 603 - -
Car08g01059 654 Gene3D - 33 134 IPR038408 -
Car08g01059 654 Gene3D - 145 244 IPR038408 -
Car08g01059 654 Gene3D Transferase(Phosphotransferase) domain 1 400 612 - -
Car08g01059 654 Gene3D Phosphorylase Kinase; domain 1 284 399 - -
Car08g01059 654 ProSiteProfiles Protein kinase domain profile. 324 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01059 654 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Car08g01059 654 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
Car08g01059 654 Pfam Protein kinase domain 325 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01059 654 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 10 636 - -
Car08g01059 654 ProSiteProfiles Gnk2-homologous domain profile. 33 134 IPR002902 -
Car08g01059 654 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 10 636 - -
Car08g01059 654 Pfam Salt stress response/antifungal 156 241 IPR002902 -
Car08g01059 654 Pfam Salt stress response/antifungal 48 132 IPR002902 -
Car08g01059 654 SMART serkin_6 324 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01059 654 SUPERFAMILY Protein kinase-like (PK-like) 309 625 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01059 Car-Chr8 10279858 10284981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01059 1 654 Receptor kinase-like Gene Family AT1G70520 65.396 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car08g01059 Pkinase 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01059 - - gmx:100804094 1052.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01825 07 19410188 19414434 Car08g01059 08 10279858 10284981 PCT