Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01049 ATGTCTTATCTAACTCAAATTCTTTCACTTTTTCTCATTCTTCTAGCATCTTCACTACTAAGTGTGTTTTCAATTGAAGTTTCAATAAAAAACACATACATAGAACCTTTTAAATGTTCTACAAAAATAAGAACATGCAATGCTTCACTCTACCACATAAACTACGATCAAAAGATAGAACAAATAGCCCATTTTTACTCTATTGGTGTTTCACAAATCAAACCCATAATTCGTAGCAATAAACAAGATTACCTAGTAAAAGTGCCTTGTTCTTGCAAAAACACCAATGACCTTAGTGGATATTTCTATGAAACAAACTACATGGTTAGTCCTAATGAGAGTTTTGTGGATGTTAACACACTTGTTTATAGTGGTCAAGCTTGGCAAGTCAACGAAGATTTGGTTCCAAATGAGAATGTAACAATAAATATTCCTTGTGGTTGTTCGGAATTTGAGTCACAAATTGTTGTTACATATACAGTTCAACATAGTGATACACCAAATTCAATTGCTCTTATGCTAAATGCTACTGTTGATGGCATGGTTAGAATGAATCAAGTTTTGGGTCCTAACCCTACATTCATAGATATTGGTTGGGTGTTATATGTTCCTAAGGAATTAAAAGGATCTCCACTTTCCCATGGAAAAGGAAAGAAACACAAGTGGGAAGCTATTATTAGTATCTTAGTGAGTGTGACATTACTTTCAGTTATTACCATGATTGTTCTCATTCTCAGGAGACATAAACCCTATGGAACCACCAAAAAGGATCCAAAAACTGTCTCTAAAAGATCATTTGGCAATAGAACTATTTCCATAAGGAATCATGACTTTCATAAAGAATATATGGAAGATGCAACACAATTTGATCCAGAAAGACCAGTAATTTATGCTTTTGAGGAGATTGAAGATGCTACAAATAACTTTGATGAAACTAGAAGGATTGGAGTTGGTGGATATGGAACTGTCTATTTTGGAATGCTAGATGATAAAGAGGTTGCTGTTAAGAAGATGAGATCTAACAAATCCAAAGAGTTCTATGCAGAACTCAAAGCATTATGCAAGATCCATCACATTAACATTGTTGAGTTATTGGGATATGCAAGTGGAGATGACCACCTTTATTTGGTGTATGAGTATGTTCCTAATGGATCTCTTAGTGAACACCTTCATGATCCACTACTCAAAGGTCACCAGCCTCTTTCTTGGTGTGCTAGAACTCAAATTGCACTTGATGCAGCAAAAGGTGTTGAATACATACATGATTACACAAAAGCGCGATATGTTCACCGTGATATAAAGACTAGTAATATTCTTCTTGATGCGAAGCTCAGAGCAAAGGTAGCAGATTTTGGACTTGCAAAACTAGTAGAAAGAACCAATGATGAAGAATTCTTAGCAACAAGGCTTGTTGGAACACCAGGCTACCTTCCACCAGAATCTGTGAAGGAGCTTCAAGTGACAATAAAAACTGATGTATTTGCATTTGGAGTGGTTCTGTCTGAATTGATAACAGGAAAAAGAGCATTATTTCGTGACAACCAAGAAGCCAATAATATGAAATCACTTATTGCAGTTATTAACAAAATATTTCAAGATGATGACCCGGTGAGTGCTTTAGAAGCAACTGTAGATGGAAATCTTCTACGTAGTTATCCTCTTGAAGATGTCTACAAGGTGGCAGAATTATCTCATTGGTGTTTGAGTGAAAATCCAGTGGACAGACCTGAAATGAAAGAAATGGTTGTAGCATTATCAAAGATTGTAATGTCCTCAATAGAATGGGAAGCATCACTAGGTGGGGACAGTCAAGTTTTCAGTGGGGTATTTGATGGAAGATGA 1842 0.3578 MSYLTQILSLFLILLASSLLSVFSIEVSIKNTYIEPFKCSTKIRTCNASLYHINYDQKIEQIAHFYSIGVSQIKPIIRSNKQDYLVKVPCSCKNTNDLSGYFYETNYMVSPNESFVDVNTLVYSGQAWQVNEDLVPNENVTINIPCGCSEFESQIVVTYTVQHSDTPNSIALMLNATVDGMVRMNQVLGPNPTFIDIGWVLYVPKELKGSPLSHGKGKKHKWEAIISILVSVTLLSVITMIVLILRRHKPYGTTKKDPKTVSKRSFGNRTISIRNHDFHKEYMEDATQFDPERPVIYAFEEIEDATNNFDETRRIGVGGYGTVYFGMLDDKEVAVKKMRSNKSKEFYAELKALCKIHHINIVELLGYASGDDHLYLVYEYVPNGSLSEHLHDPLLKGHQPLSWCARTQIALDAAKGVEYIHDYTKARYVHRDIKTSNILLDAKLRAKVADFGLAKLVERTNDEEFLATRLVGTPGYLPPESVKELQVTIKTDVFAFGVVLSELITGKRALFRDNQEANNMKSLIAVINKIFQDDDPVSALEATVDGNLLRSYPLEDVYKVAELSHWCLSENPVDRPEMKEMVVALSKIVMSSIEWEASLGGDSQVFSGVFDGR 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01049 613 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 17 613 - -
Car08g01049 613 SMART serkin_6 309 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01049 613 Gene3D LysM domain 152 210 IPR036779 -
Car08g01049 613 Gene3D Transferase(Phosphotransferase) domain 1 381 598 - -
Car08g01049 613 SUPERFAMILY LysM domain 157 204 IPR036779 -
Car08g01049 613 ProSiteProfiles LysM domain profile. 157 203 IPR018392 -
Car08g01049 613 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Car08g01049 613 ProSiteProfiles Protein kinase domain profile. 309 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01049 613 Gene3D Phosphorylase Kinase; domain 1 288 380 - -
Car08g01049 613 Pfam Protein kinase domain 310 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01049 613 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 17 613 IPR044812 GO:0019199|GO:0045087
Car08g01049 613 SUPERFAMILY Protein kinase-like (PK-like) 293 585 IPR011009 -
Car08g01049 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01049 Car-Chr8 10115106 10120010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01049 289 613 Receptor kinase-like Gene Family AT1G51940 51.662 3.44e-117 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Car08g01049 Pkinase 5.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01049 - - gmx:100800907 929.858