Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01040 ATGTTCGGACCCTCCCAACCCGCTTCGGACACTCCCAATTCCACTATCAAATTCTTCTGTAGCTACGGCGGTAAAATCCTCCCCCGTTACCCCGACGGCAAACTCCGCTACCTCGGCGGTCATACTCGCGTCCTCTCCGTCGATCGCTCCGTTCCATTTTCTGAACTGCTTTCGAAGCTGGAAGAACTCTGCGCTTCGTCCGTGACGCACCTTCGCTGTCAATTACCCGCCGAAGATCTCGACGCTTTGGTTTCCATAACCTCCGACGAAGATCTCGCCAATTTAATCGAAGAATACGATCGTACCTCGTTGCCGCAATTACCGTTGAAGATTAAAGTGTTCATTTCGCCGCCGAGATTTTCGAACAAGGTTTCCACACCTCCGTTATTGTCTCTGTCAAAATCAGCAtcttcctctatctcatcctcctcctccgtgtcgtcgacgtcttcttcttcatcGTATTCTAGCCTTACTGGTGGCGGTTCCGGCCAGATGTATACGACGGCGCCGCCGGTATTTTACCGCTGTGTTCATCATATGTCGCCGCGGACGGAGAATCATGGCAACGATGAGAGATCTTCTGGGAGGAATATTCCCCTGCAGCGGAACGGAAACAGTTACCATGCTCAGGGAAACACCGGTGAAAATTATCTGATCCACAACGGAAACCACTGGCAATAA 684 0.4737 MFGPSQPASDTPNSTIKFFCSYGGKILPRYPDGKLRYLGGHTRVLSVDRSVPFSELLSKLEELCASSVTHLRCQLPAEDLDALVSITSDEDLANLIEEYDRTSLPQLPLKIKVFISPPRFSNKVSTPPLLSLSKSASSSISSSSSVSSTSSSSSYSSLTGGGSGQMYTTAPPVFYRCVHHMSPRTENHGNDERSSGRNIPLQRNGNSYHAQGNTGENYLIHNGNHWQ 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01040 227 MobiDBLite consensus disorder prediction 182 227 - -
Car08g01040 227 SUPERFAMILY CAD & PB1 domains 32 119 - -
Car08g01040 227 MobiDBLite consensus disorder prediction 136 162 - -
Car08g01040 227 SMART PB1_new 30 114 IPR000270 GO:0005515
Car08g01040 227 Gene3D - 34 115 - -
Car08g01040 227 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 9 226 - -
Car08g01040 227 PANTHER OS05G0427100 PROTEIN-RELATED 9 226 - -
Car08g01040 227 MobiDBLite consensus disorder prediction 194 227 - -
Car08g01040 227 CDD PB1_UP2 20 115 - -
Car08g01040 227 Pfam PB1 domain 32 114 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01040 Car-Chr8 10027428 10028953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01040 9 115 MAP Kinase Kinase Kinase AT5G57610 45.794 1.94e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01040 - - gmx:100815157 248.44