Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01037 ATGGAAGAAGCACTTTTCCGTCTCAATGGAACATCCCCAACCAACATTCCCGAACCCGAACCTAAAAAACAAACCACAGCCAACAAACGAACACTACGCGAAAACAACGCCGCAGGAAACGGAGGTGGTGGTGCCATGAGGTACCGTGGAGTACGCCGCAGACCATGGGGCCGTTACGCAGCTGAAATAAGGGACCCACAATCCAAAGAACGCCGCTGGCTTGGTACTTTCGACACGGCTGAAGAAGCCGCTTGTGCTTACGACTGCGCCGCACGTGCCATGCGTGGCTTAAAAGCTCGCACGAATTTCGTTTACCCAACTTCACCCCCTCACACTTCTCCCACTTTCCCTTCCTTCAACTTCCCACAAAAACATTCTCAACAAACAACCACTCATAACCGCCACGTGTCTTCATGTGGTTGGTCAGAACCACACAGTGTTGATTTCACTAACAATAGAAACCCTTCTAATTCACTCGACATGTTTCTGTTTCGTGAATTTATCAACTCTTCTAATAACAACAACACTTCATTAGGTTCTGACCAGTTTCCTTATTCTTCTTACAACATTAAAAATTGTTGTATGGTTAATTCTTGTGGGGGGTGTGCAAATAGCAACTTTAATGCCTCTTCTTCTACTTCTTCATTTAAGACCAACTCCAACAACGTTAACAACAACTTTGTCGGTGTTAATGAAGATTCAGAGTTTTTTCCCAGAGAGTCGTCTGATTCTGGATTATTGGAAGAGATTGTGAACAAGTTTTTACCGAAAACAAAGCAAGAGAAAAACGAGATTTCACCACAGACAGAAACTTTTTGCAACACTTTTGTTCCTGAAGTTCCTTTTCATGATAACACGGTTGTTTCTTCTACTCAATGGTATAATGAGGGTAAAAAGGGGATTTCCAAGAACGAGGGTTTTGGTGTTTCTTTTGACAGTCACAATGCTTTCAATGTGCAACAGTTTGAACCTTTTAATAATAATGGGTTTAATGCTTTGCAGTCTCTGCCTCTTGGAAATGAACAGATCATGGTGAATCATGCTGAGAATTTTGTTATTCAAGATATATTTCAGTATCAAGAGCTTCTTAATGCTTTTGCAATGAGGATGCAAAATGCTTAA 1122 0.418 MEEALFRLNGTSPTNIPEPEPKKQTTANKRTLRENNAAGNGGGGAMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYPTSPPHTSPTFPSFNFPQKHSQQTTTHNRHVSSCGWSEPHSVDFTNNRNPSNSLDMFLFREFINSSNNNNTSLGSDQFPYSSYNIKNCCMVNSCGGCANSNFNASSSTSSFKTNSNNVNNNFVGVNEDSEFFPRESSDSGLLEEIVNKFLPKTKQEKNEISPQTETFCNTFVPEVPFHDNTVVSSTQWYNEGKKGISKNEGFGVSFDSHNAFNVQQFEPFNNNGFNALQSLPLGNEQIMVNHAENFVIQDIFQYQELLNAFAMRMQNA 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01037 373 ProSiteProfiles AP2/ERF domain profile. 47 104 IPR001471 GO:0003700|GO:0006355
Car08g01037 373 Pfam AP2 domain 47 96 IPR001471 GO:0003700|GO:0006355
Car08g01037 373 CDD AP2 47 103 IPR001471 GO:0003700|GO:0006355
Car08g01037 373 MobiDBLite consensus disorder prediction 1 48 - -
Car08g01037 373 SMART rav1_2 47 110 IPR001471 GO:0003700|GO:0006355
Car08g01037 373 Gene3D AP2/ERF domain 46 105 IPR036955 GO:0003700|GO:0006355
Car08g01037 373 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 14 373 - -
Car08g01037 373 SUPERFAMILY DNA-binding domain 47 104 IPR016177 GO:0003677
Car08g01037 373 MobiDBLite consensus disorder prediction 8 22 - -
Car08g01037 373 PRINTS Ethylene responsive element binding protein signature 48 59 IPR001471 GO:0003700|GO:0006355
Car08g01037 373 PRINTS Ethylene responsive element binding protein signature 70 86 IPR001471 GO:0003700|GO:0006355
Car08g01037 373 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 14 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01037 Car-Chr8 9997046 9998167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01037 1 330 AP2-EREBP Transcription Factor Family AT1G24590 36.390 4.93e-46 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Car08g01037 AP2 2.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01037 - - gmx:102669715 290.041