Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01027 ATGGCTGAAAGCTTTGACAGTGCTACCTCTAACCTTCTATGTTCTGAGAATAATAGCACATGTTTTGATGAGGATTTGGAATGTAATGGTGTTGATGATGGTTCTGGAATCTCACCTTCTTCTTGGGACCACCACACAAACCTTAACTTGGACAACCTTGGATCGGATTCTTTTATGTGTTTTGTTGCACATAGTGATGAAATTGTGAGGGTTATGGTTGAGAAAGAGAGAGAACATTTGCCTAGAGAGGATTATTTGATGAGACTTCGAAGTGGTGATTTGGATTTGAGTGTTAGGAGGGAGGCTCTTGATTGGATTTGGAAGGCTCATGCTTATTATGGATTTGGACCCTTGAGCCTTTGCCTATCCGTGAACTACTTGGATCGATTTCTATCGGTTTTTCAATTACCGAGAGGCGTGAGTTGGACTGTGCAATTGTTAGCTGTAGCTTGCTTCTCACTTGCAGCTAAAATGGAAGAGGTTAAAGTTCCTCAATCTATAGATTTACAGGTTGGAGAACCGAAGTTTGTATTCCAAGCCAAAACCATTCAGAGAATGGAACTAATGATACTAAGCTCATTGGGGTGGAAAATGCAGGCTTTGACTCCTTGTTCTTTCATAGACTACTTCCTTGCTAAGATCACTTGCGAGGACCATCCCGATAAGTTGTCGATCGCGAGATCGGTGCAGCTCATCCTTAACATAATAAAGGGTATTGACTTCTTGGAATTCAGGCCTTCCGAAATTGCTGCCGCGGTTGCGATTTCTGTCTTAAAGGAAATGCCAGCACAAGAGATTGATAAGGCAATAACTGATTTCTACATTGTAGAGAAGGAGAGAGTTCTAAAATGTGTTGAAATGATAAAAGATCTTTATGAGTGA 882 0.4104 MAESFDSATSNLLCSENNSTCFDEDLECNGVDDGSGISPSSWDHHTNLNLDNLGSDSFMCFVAHSDEIVRVMVEKEREHLPREDYLMRLRSGDLDLSVRREALDWIWKAHAYYGFGPLSLCLSVNYLDRFLSVFQLPRGVSWTVQLLAVACFSLAAKMEEVKVPQSIDLQVGEPKFVFQAKTIQRMELMILSSLGWKMQALTPCSFIDYFLAKITCEDHPDKLSIARSVQLILNIIKGIDFLEFRPSEIAAAVAISVLKEMPAQEIDKAITDFYIVEKERVLKCVEMIKDLYE 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01027 293 PANTHER CYCLINS 1 291 IPR039361 -
Car08g01027 293 SMART cyclin_7 104 192 IPR013763 -
Car08g01027 293 Gene3D - 82 199 - -
Car08g01027 293 ProSitePatterns Cyclins signature. 99 130 IPR006671 -
Car08g01027 293 SUPERFAMILY Cyclin-like 56 198 IPR036915 -
Car08g01027 293 Pfam Cyclin, C-terminal domain 202 292 IPR004367 -
Car08g01027 293 PANTHER CYCLIN-D4-1-LIKE 1 291 - -
Car08g01027 293 CDD CYCLIN 99 191 IPR013763 -
Car08g01027 293 Gene3D - 72 288 - -
Car08g01027 293 Pfam Cyclin, N-terminal domain 67 198 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01027 Car-Chr8 9765988 9768565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01027 63 269 Core Cell Cycle Gene Families AT5G65420 59.809 1.28e-88 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01027 K18810 - gmx:100794010 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01027 08 9765988 9768565 Car07g01859 07 20735487 20737751 PCT