Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01015 ATGGCTCTTCCTGGTTCCCTGCAACTGTCCCATGGATTGGGATTTTGCAGGAACCTGAGCTTCAATATAGATCAGGTACTAGAAATATCTTCAGTTCTGCACAATCTTCCATTGCAGTTCATGAAACAGGACTACAGGGGTCTTCAACACCTCCGTCATGTAAACAGGTCAACACTTACATTGTCTTGCAAATCCCGCTCTTTTAAATGTCATTGTTTTTTAGTGCCCGGACAAGGAATTGGTCTTCCTGCTGTCAAGGTGGCTACTACAGTGCTGGCAAGGTGCTTATGGGGTGTTGGACCATTAATGTTTCAGACAAGGAAACTGTTCTTTCAGAGGAGTGATAATAGTTGGAAAAAGAGTACCACTCATTACATAGTAACTTCATACCTTCGACCATTACTGTTATGGACTGGAGCCGTACTTATTTGCAGAGCATTTGAGCCAGTAATTTTACCTACAGAAGCTAGCCAGGCTGTTAAGGAACGACTTTTGAATTTTGTTAAATCATTGTCAACTGTAGTGGCTTTCGCCTATTGTTTATCAAGTGTAATTCAACAAGCACAGAAATTTGTAGCAGAGAGTACTGATGCAAGCGAGACAAGAAATATGGGGTTCCAATTTGCAGGCAAAGCTGTTTATTCTGCAGTATGGATTGCTGCCTTTTCATTGTTTATGGAATTGCTGGGCTTCTCCACCCAGAAATGGGTCACTGCAGGAGGTTTTGGGACAGTTTTGTTGACTCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCAAGCGCGATGATTCATGCTACTCGGCCGTTTGTGGTAAATGAATGGATTCAAACGAAGATTGAAGGATATGAGGTTTCTGGCACTGTTGAGCATGTTGGCTGGTGGTCACCAACAATCATTCGAGGTGAAGATCGTGAAGCTGTACACATTCCAAACCACAAATTTACAGTGAATGTTGTGCGGAACCTCAGTCAAAAAACACATTGGAGAATCAAAACCCACCTAGCCATTAGTCATTTGGATGTAAATAAGATTAATAACATTGTTGCTGACATGCGGAAAGTATTAGCCAAAAATCCTCAAGTTGAGCAGCAGAGGTTGCACAGGAGAGTATTTTTGGACAATATAAACCCTGAAAACCAGGCTCTTATGATTCTGGTGTCTTGTTTTGTTAAGACCTCACATTTTGAAGAATATTTGTGTGTTAAGGAAACTATACTATTGGATCTTCTTAGAGTTATCAGCCATCACCGAGCCCGGCTTGCAACACCAGTTCGTACCCTGCAGAAAATATATAGTGATGCTGACTTGGATAACATACCATACACAGATTCTGCTGGAACAGTAACTAACCGTCCACTGTTAGTGATTGAATCGCCTTACAAGAACAATGCAGATGATAAAATGAAAAGTCGATCAGCACGTGCAACTGTTGATCAAGATAACAAGACAACTGTGCGAAACAAACTCGATATCAAGACAGATGACAAAGTTGGACCAACAGGAGCACCAGATATCAAGGTTAGAGGAACTCAAGATGACTCTGAGGTGAATGCCAAAGTCATAGCATTTAATTCCGATGTAAATGGAAACTCTAAACCTGACCATGAAGTCGGTGAAAACAAGACACTTAAATCAAATTTAAACAAGGAAAATGTAGAGGTGCCAGAAATGTCATCTATTTCCAACTCCAAGGGTCAAACCATTAAAAACATCAAGCCAAACATCGACTCTGATAACCTAGTTTTCTCATCAACAACCAACACTGACAAAGCCAATGGACTTCCTACAAATATGCCAACAAAACAGCAAGGAGAAAGGAAATCTGCTCCATCTAGGCCTGTTCTTGAAGAGAATCTAGTACTGGGAGTTGCATTGGAGGGATCAAAGAGGACACTTCCTATTGATGAGGGGAATGACACAGTGACAACTCAAGATGCAAAGGAAATGGCTGCATTCCAGGGTGGAAATGGATCTCCAAAAGCTACTGATGGGAATGTAAATTAA 2007 0.4116 MALPGSLQLSHGLGFCRNLSFNIDQVLEISSVLHNLPLQFMKQDYRGLQHLRHVNRSTLTLSCKSRSFKCHCFLVPGQGIGLPAVKVATTVLARCLWGVGPLMFQTRKLFFQRSDNSWKKSTTHYIVTSYLRPLLLWTGAVLICRAFEPVILPTEASQAVKERLLNFVKSLSTVVAFAYCLSSVIQQAQKFVAESTDASETRNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQKWVTAGGFGTVLLTLAGREIFTNFLSSAMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALMILVSCFVKTSHFEEYLCVKETILLDLLRVISHHRARLATPVRTLQKIYSDADLDNIPYTDSAGTVTNRPLLVIESPYKNNADDKMKSRSARATVDQDNKTTVRNKLDIKTDDKVGPTGAPDIKVRGTQDDSEVNAKVIAFNSDVNGNSKPDHEVGENKTLKSNLNKENVEVPEMSSISNSKGQTIKNIKPNIDSDNLVFSSTTNTDKANGLPTNMPTKQQGERKSAPSRPVLEENLVLGVALEGSKRTLPIDEGNDTVTTQDAKEMAAFQGGNGSPKATDGNVN 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01015 668 MobiDBLite consensus disorder prediction 580 614 - -
Car08g01015 668 MobiDBLite consensus disorder prediction 494 513 - -
Car08g01015 668 Pfam Mechanosensitive ion channel 211 418 IPR006685 GO:0016020|GO:0055085
Car08g01015 668 Gene3D - 270 325 IPR023408 -
Car08g01015 668 MobiDBLite consensus disorder prediction 580 608 - -
Car08g01015 668 MobiDBLite consensus disorder prediction 465 486 - -
Car08g01015 668 Gene3D - 164 268 - -
Car08g01015 668 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 95 IPR045042 -
Car08g01015 668 MobiDBLite consensus disorder prediction 554 573 - -
Car08g01015 668 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 1 95 - -
Car08g01015 668 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 96 668 - -
Car08g01015 668 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 96 668 IPR045042 -
Car08g01015 668 SUPERFAMILY Sm-like ribonucleoproteins 254 324 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01015 Car-Chr8 9584801 9594021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01015 9 658 Mechanosensitive Ion Channel Family AT5G10490 54.414 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01015 K22047 - gmx:100789444 1000.73