Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00992 ATGGAAAACACTTTATCAAATGAAAAGGAAATACCTGTCTTTGGTTGGGCTGCTAGAGACTCCTCAGGAATTCTCTCCCCTTTCAGTTTCTCTAGAAGGGCCAATGGAGATCGTGATATCACTATAAAGATACTCTATTGTGGGATTTGCCATGCAGACGTTCATTTTGCCAAGGATGAACTAGGCCATAGCATTTTTCCCATGGTTCCGGGACACGAAATAGTGGGTGAAGTGATTAAGGTAGGTCCAAATGTAACAAAATTCAAAATTGGGGACATAGCAGGAGTGGGTCCATTTTGTGGTTCATGCGGTTCATGTTCGAATTGTGAGAAAGGTTGGGAAAGTTATTGTTCCAAAGCCATTTTAACTTATAATGCACATGACCATGATGGATCAATAACCTATGGTGGATACTCAAATAAAATAGTGGTTAATGAACATTTTGCTATTATAATGCCAAAAGGGTTACCACTAGAAGGTGCAGCACCATTGCTATGTGCTGGATTAACAGTTTATAGTCCAATGATGCATCATGGATTGTGTCAAAGTGGACAACATTTGGGTGTTGTTGGTTTAGGTGGACTTGGTCATGTGGCGGTTAAGTTTGCTAAGGCTTTTGGCATGAAAGTTAGTGTCATAAGTACTTCCCCTGGAAAAAAGAAGGAAGCTTTGGAAAGGCTTGGTGCGGATTCGTTCTTGCTCATCAATGATCAACAACAATTGCAGGAAGCAAAGGACACAATGGATGGCATCATTGACACAGTTTCAGGCCCTCACTCACTCCACCCATTAATTGATATGTTGAAGACATGTGGAAAATTGATTTTAGTGGGTGCATCCATTACACCTCCTGTTTTGCCATACATGCCTTTGATGTTTGGGAGGAAGATAATTGCTGGTAGTGCTGGGGGAGGAATGAAAGAGAGCCAAGACATGATGGATTTTGCGGCAAAGCATAATATCACAGCAGATATTGAAGTGATTTCCATGGATTATGTGAACACTGCTTTTGAGCGTCTTGCTAAGAATGATGTTAAATATCGATTTGTCATCGATGTGGCTAACACTCTTAATTAA 1077 0.4067 MENTLSNEKEIPVFGWAARDSSGILSPFSFSRRANGDRDITIKILYCGICHADVHFAKDELGHSIFPMVPGHEIVGEVIKVGPNVTKFKIGDIAGVGPFCGSCGSCSNCEKGWESYCSKAILTYNAHDHDGSITYGGYSNKIVVNEHFAIIMPKGLPLEGAAPLLCAGLTVYSPMMHHGLCQSGQHLGVVGLGGLGHVAVKFAKAFGMKVSVISTSPGKKKEALERLGADSFLLINDQQQLQEAKDTMDGIIDTVSGPHSLHPLIDMLKTCGKLILVGASITPPVLPYMPLMFGRKIIAGSAGGGMKESQDMMDFAAKHNITADIEVISMDYVNTAFERLAKNDVKYRFVIDVANTLN 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00992 358 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Car08g00992 358 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Car08g00992 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Car08g00992 358 PANTHER ALDEHYDE REDUCTASE 1 358 - -
Car08g00992 358 Gene3D - 167 323 - -
Car08g00992 358 CDD CAD1 14 352 - -
Car08g00992 358 Pfam Alcohol dehydrogenase GroES-like domain 38 150 IPR013154 -
Car08g00992 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Car08g00992 358 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 358 - -
Car08g00992 358 Gene3D - 16 353 - -
Car08g00992 358 SUPERFAMILY GroES-like 21 185 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00992 Car-Chr8 9293530 9295686 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00992 14 358 Monolignol Biosynthesis Gene Families AT4G37990 62.029 5.56e-142 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00992 - - fve:101301572 517.309