Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00988 ATGGCAACACAACATGAATTGGAGCATCCCAATAAGGCCTTTGGTTGGGCAGCTAGAGACACTTCTGGTGTTCTTTCTCCTTTCAACTTCTCTAGAAGGGAAACAAGTGAAAAAGATGTAGCGATCAAAGTTTTGTATTGTGGCATATGTCACTCTGATCTCCACATGGCCAAAAATGATTGGGGCATATCCACCTATCCACTAGTACCCGGGCATGAGATAGTTGGAATAGTGACAAAAGTGGGAAGCAAAGTAGAAAAGTTCAAAATTGGAGAGAAAGTGGGTGTGGGCTTCATGGTTGATTCATGTCGATCATGTCAAAATTGTAGTGACAATCTTGAAAATTATTGCCCTAAACCCTATACACCCACATCTGGTGGCAAGCATAGTGATGGAAGCATAACATATGGAGGCTATTCTGACTCAATTGTTGTTGATGAGCACTTTATTGTTCACATTTCTGATGGTTTACCACTTGAATCTGCTGCTCCACTCCTCTGTGCTGGTATCACTGTTTATAGTCCTCTTAAATATTTTGGACTCGACAAACCTGGTTTGCATATTGGTATTGTTGGTCTTGGTGGACTTGGTCATTTGGCTGTCAAGTTTGCCAAAGCTTTTGGTGCTTATGTCACTGTCATTAGTACTTCTCCCAACAAAGAGAAAGAAGCCTTGGAACACCTAGGTGCTGATTCATTTCTCGTAAGCCGTGACCAAGATAAGATGCAGGCTGCAATGAACACATTGGATGGTATTCTTGATACAGTTTCAGGGGATCATTCCCTCTTACCTCTACTTGGATTACTAAAGTCTCATGGAAAACTTGTAATGCTCGGTGTACCAACCAAGCCTCTCGAGATCTCCGCTTTTCCTTTAATTTTAGGGAGAAAATTGGTAGCTGGAAGTGCAATTGGAGGACTGAAGGAAACTCAAGAGATGATTGATTTTGCAGCTAAGCACAATGTAAAACCTGATGTTGAAATCATTCCTATGGATTATGTTAACACAGCAATGGAACGACTACTCAAAGCCGATGTTAAATATCGATTTGTGATTGACATTGGAAACACTCTAAAACCAAGTTCTTAA 1089 0.4086 MATQHELEHPNKAFGWAARDTSGVLSPFNFSRRETSEKDVAIKVLYCGICHSDLHMAKNDWGISTYPLVPGHEIVGIVTKVGSKVEKFKIGEKVGVGFMVDSCRSCQNCSDNLENYCPKPYTPTSGGKHSDGSITYGGYSDSIVVDEHFIVHISDGLPLESAAPLLCAGITVYSPLKYFGLDKPGLHIGIVGLGGLGHLAVKFAKAFGAYVTVISTSPNKEKEALEHLGADSFLVSRDQDKMQAAMNTLDGILDTVSGDHSLLPLLGLLKSHGKLVMLGVPTKPLEISAFPLILGRKLVAGSAIGGLKETQEMIDFAAKHNVKPDVEIIPMDYVNTAMERLLKADVKYRFVIDIGNTLKPSS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00988 362 Pfam Zinc-binding dehydrogenase 195 318 IPR013149 -
Car08g00988 362 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 323 IPR036291 -
Car08g00988 362 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Car08g00988 362 SUPERFAMILY GroES-like 20 185 IPR011032 -
Car08g00988 362 Pfam Alcohol dehydrogenase GroES-like domain 38 152 IPR013154 -
Car08g00988 362 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 361 - -
Car08g00988 362 SMART PKS_ER_names_mod 23 352 IPR020843 GO:0016491
Car08g00988 362 Gene3D - 168 324 - -
Car08g00988 362 CDD CAD1 14 353 - -
Car08g00988 362 Gene3D - 16 354 - -
Car08g00988 362 PANTHER ALDEHYDE REDUCTASE 1 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00988 Car-Chr8 9247608 9250551 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00988 12 361 Monolignol Biosynthesis Gene Families AT4G37990 69.143 1.30e-164 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00988 - K23232 gmx:100816901 573.933