Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00987 ATGGCTTTACAACCAGAGGCTGAGCATCCCAAAAAGGCTTTCGGATGGGCAGCTAGAGATTCATCTGGTGTCCTCTCTCCTTTCAAGTTCTCCAGAAGGGAAACAGGGGAGAAAGATGTGACATTCAAAGTACTATATTGTGGTATATGTCATTCGGATCTGCACATGCTGAAGAACGAATGGGGAAGTTCTATTTACCCTATAGTTCCGGGGCATGAAATTGCTGGTGAAGTGACAGAGGTAGGAAGCAAGGTGAAAAAGTTCAAAGTTGGAGATAAGGTAGGTGTGGGGTGCTTGGTTGGATCATGTGACTCATGTCAAAGTTGTAGCGATGATCTTGAGAATTACTGCTCAAAGATGATTCTTACATATAGTGCCAAGAATGTTGATGGAACAGTCACATATGGAGGCTACTCTGACACAATGGTTGCAGATGAACACTTTGTCATCCTTATTCCAGATGGTTTACCACTTGATGTTGCTGCTCCTCTCCTTTGTGCTGGAATCACAGTGTATAGCCCTTTGAAGTATTTTGGACTTGACAAGCCTGGTTTAAATTTGGGTGTGGTTGGTCTTGGTGGCTTAGGTCATATGGCTGTTAAGTTTGCCAAAGCTTTTGGTGCCAATGTAACTGTCATAAGTACTTCTCCTAACAAAAAGAAGGAAGCTATTGAACACTTAGGAGCTGACTCTTTTGTGGTTAGTCGCGAACAAGACCAAATGCAGGCTGTAATGGGCAGCTTTGATGGTATCATTGACACCGTTTCAGCAATGCATCCTCTGTTGCCTTTGATTGGTCTATTGAAGAATCATGGTAAACTTGTTATGGTCGGTGCTCCAGAGAAGCCTTTGGAGCTTCCAGTATTTCCTTTAATTGGAGGGAGGAAGATAATTGGTGGTAGTTGCATTGGAGGATTAAAGGAGACACAAGAAATGATTGATTTTGCTGCTAAACATGATGTGAAACCTGATATTGAGGTTGTTCCGGTAGATTATATAAATACTGCAATGGAGCGTTTACTCAAAGGAGATGTGAAATATCGATTTGTTATTGACATTGGAAACACGCTGAAACCAAGCTCTTGA 1086 0.4208 MALQPEAEHPKKAFGWAARDSSGVLSPFKFSRRETGEKDVTFKVLYCGICHSDLHMLKNEWGSSIYPIVPGHEIAGEVTEVGSKVKKFKVGDKVGVGCLVGSCDSCQSCSDDLENYCSKMILTYSAKNVDGTVTYGGYSDTMVADEHFVILIPDGLPLDVAAPLLCAGITVYSPLKYFGLDKPGLNLGVVGLGGLGHMAVKFAKAFGANVTVISTSPNKKKEAIEHLGADSFVVSREQDQMQAVMGSFDGIIDTVSAMHPLLPLIGLLKNHGKLVMVGAPEKPLELPVFPLIGGRKIIGGSCIGGLKETQEMIDFAAKHDVKPDIEVVPVDYINTAMERLLKGDVKYRFVIDIGNTLKPSS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00987 361 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Car08g00987 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 322 IPR036291 -
Car08g00987 361 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Car08g00987 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Car08g00987 361 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 360 - -
Car08g00987 361 SUPERFAMILY GroES-like 20 184 IPR011032 -
Car08g00987 361 CDD CAD1 14 352 - -
Car08g00987 361 PANTHER ALDEHYDE REDUCTASE 1 360 - -
Car08g00987 361 Pfam Alcohol dehydrogenase GroES-like domain 38 150 IPR013154 -
Car08g00987 361 Gene3D - 167 323 - -
Car08g00987 361 Gene3D - 16 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00987 Car-Chr8 9243536 9245626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00987 11 360 Monolignol Biosynthesis Gene Families AT4G37990 71.714 3.15e-171 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00987 - K23232 gmx:100809071 603.979