Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00985 ATGGCTTTCTCCAACTCAATTACTTTCCTCTTCATTACTTTCCTCTTCCTAAAATACCCCAATGTCAATTCACAATCACAGGTGTCAGGATTAGAAACTTTTACTTTCACCATAAATCAATTCAAGAGAGCAAATCCCAACATAGTTTTCGAGGGTGATGCCTCAGTCTCTGGTGGCATTCTAAAACTAACAAAAACCGATCAATTAGGTAAACCACTCTCAAAAAGCGTTGGACGTGCAATCCATCTCACACCGATTCACATATGGGACAAAATCAATGGAGAATTAGCAGATTTCTCCACTACTTTTATCTTTGCGGTGAACACGAACGGTTCACAACTTCATGGAGATGGGTTTACTTTCTTTTTGGGACCAATTGATTTTGACTTACCCAAAAATTCAAGTGGAGGGTATCTTGGTCTTTTCAACCCAGAAACCGCACTTATCCCATCCGAAAACCCAATACTAGCTATTGAATTTGATAGTTTTACAAATGAGTGGGACCCAACTGCGCCGTTTCAATCACCTCACATTGGAATTGATGTTGGTTCTATTGATTCAGTTGCAACTACCGATTGGCCTATTGATTTTGTACAAAGAAATGCTATAGGAGAAGCTAGTATAAACTATAACTCTGAATCTAAAAGATTAAGTGTATTTGTGGCTTATCCAGGGAGTGGGAGGAATGTTACTGGGGTCTCCTCTATTGTTGATTTGAGGAGTGTTCTTCCTGAATGGGTTAGGGTTGGTTTCACTGCTGCTACTGGAGAATTGGTTGAAACACATGATATCATTAGTTGGTCTTTTGAATCAGCTTTGTAA 822 0.3917 MAFSNSITFLFITFLFLKYPNVNSQSQVSGLETFTFTINQFKRANPNIVFEGDASVSGGILKLTKTDQLGKPLSKSVGRAIHLTPIHIWDKINGELADFSTTFIFAVNTNGSQLHGDGFTFFLGPIDFDLPKNSSGGYLGLFNPETALIPSENPILAIEFDSFTNEWDPTAPFQSPHIGIDVGSIDSVATTDWPIDFVQRNAIGEASINYNSESKRLSVFVAYPGSGRNVTGVSSIVDLRSVLPEWVRVGFTAATGELVETHDIISWSFESAL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00985 273 PIRSF Plant_L_lectin 2 273 IPR016363 GO:0030246
Car08g00985 273 CDD lectin_legume_LecRK_Arcelin_ConA 34 273 IPR001220 GO:0030246
Car08g00985 273 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 272 IPR013320 -
Car08g00985 273 ProSitePatterns Legume lectins alpha-chain signature. 243 252 IPR000985 -
Car08g00985 273 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 5 273 - -
Car08g00985 273 Gene3D - 32 273 - -
Car08g00985 273 Pfam Legume lectin domain 35 271 IPR001220 GO:0030246
Car08g00985 273 PANTHER LECTIN 5 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00985 Car-Chr8 9217266 9218333 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00985 36 273 Receptor kinase-like Gene Family AT5G10530 35.802 1.01e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00985 - - vun:114166153 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01889 07 21286949 21289062 Car08g00985 08 9217266 9218333 PCT