Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00984 ATGACCAACTCACATAACCCTTTAGTTGTTTTCCTTTTAACCTTTATCTTTTCCCTCTTGTTAATCACCAATGTCAAATCAGAATCATTTTCTTTCGAATTCCCTGACTTTGACACCGACAGTGAAAGCATCCTCGTGGACGGGGATGCTAACACAACTGATGGAGTACTACAATTGACGAAAAAAGACCAACTTGGAAAACCATTTCCACATAGTGTTGGTCTTTCTGTATTCTTCGGAGTTATTCATCTATCTGATAAACAAAGTGGTAAAGTTGCTGACTTTACCACCGAGTTTTCTTTTGTTGTGAACCCAAAAGGTTCAGAACTTCACGGAGATGGATTCACTTTCTTTATTGCATCAGTCGGTTTTGAATTCCCAGAGAATTCAACCGATGGTGGATTCCTTGGACTTTTCGATAAAGAAACCGCCTTCAATACCTCTAAAAACTCGATCGTTGCGGTTGAGTTTGATAGTTTTACAAACGAATGGGACCCTCGTTACCCCGAAAACTCTCCTCATATAGGAATTGACATCAACACGATTGAGTCTTCCGTCGTTGTTCCATGGACGATCGATCAACAGCCAGAAGGATCGATCGGAAAAGCGGGCATAACTTATGGTAGCAACTCAAAAGAATTGAGTGTGATTGTAACTTATGAAAATAGTCCTGGAAAAGTTGAGACTTCAACTTTATCATATCCTATTGATTTTGCAAATGTTCTTTCAGAATGGGTGGTTATTGGTTTCTCAGGTTCCACGGGTGAAATTGCTGAAACACATGACATTCTTTCATGGTCTTTCACTTCGTCCTTGTAG 819 0.398 MTNSHNPLVVFLLTFIFSLLLITNVKSESFSFEFPDFDTDSESILVDGDANTTDGVLQLTKKDQLGKPFPHSVGLSVFFGVIHLSDKQSGKVADFTTEFSFVVNPKGSELHGDGFTFFIASVGFEFPENSTDGGFLGLFDKETAFNTSKNSIVAVEFDSFTNEWDPRYPENSPHIGIDINTIESSVVVPWTIDQQPEGSIGKAGITYGSNSKELSVIVTYENSPGKVETSTLSYPIDFANVLSEWVVIGFSGSTGEIAETHDILSWSFTSSL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00984 272 ProSitePatterns Legume lectins beta-chain signature. 153 159 IPR019825 -
Car08g00984 272 Gene3D - 27 272 - -
Car08g00984 272 CDD lectin_legume_LecRK_Arcelin_ConA 30 272 IPR001220 GO:0030246
Car08g00984 272 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 3 272 - -
Car08g00984 272 PANTHER LECTIN 3 272 - -
Car08g00984 272 PIRSF Plant_L_lectin 2 272 IPR016363 GO:0030246
Car08g00984 272 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 272 IPR013320 -
Car08g00984 272 Pfam Legume lectin domain 30 271 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00984 Car-Chr8 9214732 9215774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00984 10 272 Receptor kinase-like Gene Family AT5G10530 35.714 7.42e-36 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00984 - - gmx:100804280 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00984 08 9214732 9215774 Car07g01889 07 21286949 21289062 PCT
Car07g01890 07 21293361 21294376 Car08g00984 08 9214732 9215774 PCT