Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00950 ATGGCAATTGAAAACCAAGAGACCACTGTCAGAGAAATCAAGCCAAAGAACAGAAGAATCATGGGTGCTGGAGGTCCTGATGATGATGATGATAACAGGTGGCCACCATGGTTGAAACCTTTGTTGAAAGAAAGTTTCTTTGTTCAATGCAAGTTACATGCTGATTCTCACAAGAGTGAATGTAACATGTATTGTTTGGATTGTATGAATGGTCCTCTCTGTTCTCTCTGTCTCGCTTATCACAAAGACCATCGAGCTATTCAGATTAGGAGATCTTCTTACCATGATGTGATAAGGGTATCTGAGATTCAGAAGGTGTTGGACATTACTGGGGTTCAAACCTACATTATTAATAGTGCAAGGGTTGTGTTCTTAAATGAAAGGCCACAACCTAGGCCAGGAAAAGGTGTCACAAACACTTGTGAAGTTTGTGAGCGTAGTCTTCTTGATTCTTTCCGGTTCTGTTCTCTTGGTTGCAAGATTGTAGGAACATCTAAGAATTTCCAGAAGAAAAAGAAACATTCAGCAGCAATGGCATCAGATTCTGAGGAATCATACAGTGGCAACAACAACATCCATAGCCGTCAGATGAAAATCAAATATCAAAGCTTCACACCATCTACACCACCCCCAACTTCAGTTAATTACAGAACAACCAAGAGAAGAAAGGGAATACCACATAGAGCCCCATTAGGGGGGCTAGTTATAGAAAATTAA 717 0.4045 MAIENQETTVREIKPKNRRIMGAGGPDDDDDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGPLCSLCLAYHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSKNFQKKKKHSAAMASDSEESYSGNNNIHSRQMKIKYQSFTPSTPPPTSVNYRTTKRRKGIPHRAPLGGLVIEN 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00950 238 Pfam PLATZ transcription factor 90 161 IPR006734 -
Car08g00950 238 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 233 - -
Car08g00950 238 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 233 - -
Car08g00950 238 MobiDBLite consensus disorder prediction 202 219 - -
Car08g00950 238 MobiDBLite consensus disorder prediction 202 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00950 Car-Chr8 8735208 8737490 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Car08g00950 PLATZ 4.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00950 - - gmx:100797900 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00950 08 8735208 8737490 Car07g01911 07 21749950 21752625 PCT