Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00946 ATGGCTCCCTCTTTCGACATAACTACTCACACTGTTTGTGTTATGGACGCTTCGGGCCTATTGGGCTTTAGCCTGGCCCAAAGACTTCTTCAAAGGGGCTACACCGTTCATGCCTCACTTCAAAAATATGGGGAAGAAGATCTATTAAATGGGATTTCTGTTGATCCTAATAAGCTAAAGATTTTTCGATCAGACCCTTTTGATTATCATAGCATAACTGACGCTCTTAAAGGTTGCTCTGGCTTGTTCTACTCATTTGAACCTCCCCTTGATCAACCTAATTATGATGAATACATGGCTGACGTGGAGGTTCGAGCGGCACACAACGTGCTTGAAGCTTGTGCACAGATTGAAACAATTGATAAAGTTGTTTTCACATCCTCAGCAACTGCTGTAGTTTGGAGGGAGGATCGTAAAACCATTGAACATGATTTGGATGAGATACATTGGAGTGATGTCAATTTCTGTCGCAAATTCAAGTTATGGCATGGGATGTCAAAGACACTATCAGAGAGGACAGCATGGGCCTTAGCAATGGACAGAGGTGTGAATATGGTCTCTATTAATGCTGGATTATTGATGACTCATGATCTCTCCCTCAAACACCCTTACTTGAGAGGAGCTGCTGAAATGTACGAAGATGGAGTCTTTGTGACCGTTGATTTGAAATTCTTGGTTGATACTCACATCTGTGTCTACGAGGATGTTTCATCCTACGGTCGTTATTTGTGCTTCAATCACATTATTAATACTCAAGACGACGCCGTTCAACTTGCCCAACAGTTAACGCCTACCGCTTCTTCTTCTTTACCCCAAAGTGATGACTATGGTAAGAGTTTCATCGAACAGAAAATAAGCAACAAGAAGTTGAACAAATTGATGGTGGACTTTGACGCTTAA 900 0.4189 MAPSFDITTHTVCVMDASGLLGFSLAQRLLQRGYTVHASLQKYGEEDLLNGISVDPNKLKIFRSDPFDYHSITDALKGCSGLFYSFEPPLDQPNYDEYMADVEVRAAHNVLEACAQIETIDKVVFTSSATAVVWREDRKTIEHDLDEIHWSDVNFCRKFKLWHGMSKTLSERTAWALAMDRGVNMVSINAGLLMTHDLSLKHPYLRGAAEMYEDGVFVTVDLKFLVDTHICVYEDVSSYGRYLCFNHIINTQDDAVQLAQQLTPTASSSLPQSDDYGKSFIEQKISNKKLNKLMVDFDA 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00946 299 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 14 141 IPR002225 GO:0003854|GO:0006694|GO:0016616
Car08g00946 299 Gene3D - 5 299 - -
Car08g00946 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 265 IPR036291 -
Car08g00946 299 PANTHER CINNAMOYL-COA REDUCTASE-LIKE SNL6 8 298 - -
Car08g00946 299 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 298 - -
Car08g00946 299 CDD FR_SDR_e 12 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00946 Car-Chr8 8690881 8694504 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00946 11 297 Monolignol Biosynthesis Gene Families AT5G58490 31.579 5.47e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00946 - - gmx:100793329 547.74