Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00934 ATGACATTGGTTATCAGAGAAAGAAGGCGTAAACAAGCTCTAAGCCTTTCCTTACCAAAAAAACATCAAATTCCATCTTCTAATAACTTCCCTAACAAAACCCAAATGCCATCTTTGTTTTCATCACCATCTTCTCATCATGGCATAAGAAGCCTTCTAGATCTTGAAAAAGTAGCAGTACTTGGTCATGGAAATGGTGGAATAGTCTATAAAGTTCATCATAAGAAAAACTACAATTCCTTTTATGCATTGAAAGTTCTTCGCTTTGATCAAAATGGCATTGGTTTTCGGCAGCCACCGACGCTAGAAGCTGAGATTCTCAAAAGGGCTGACTCGCCTTATATTGTAAGGTGTCATGCAGTTTTTTACAATGGTGATTGTAATGGTGGTGGTGGTGATCTTAGCTTTGTTATGGAGTATATGGAAGGAGGTTCATTGTATGATATATTGCAGCAACATCATAGACTTCCTGAGGAAGTTATTTGTGTTTTGGCCAAGAGTGTTTTAGAAGGCCTAAACTATTTACATGGTATGAACATTGTTCATAGAGATATTAAGCCTTCAAATTTGCTTGTAAATGAAAAAGGGGAGGTGAAAATAGCAGATTTTGGAGTGAGTCATGTAGTAGAAGGGAGGTTTAAAGGGAATGATATGAATGCAGAAGGTACATGTGCTTATATGAGTCCAGAAAGATTTGATCTTGAAAGATGGGGTGGTGAAAATGCTGATGAATTTGTAGGTGATGTTTGGTCATTAGGTGTTGTCATGTTGGAATGTCTTTTGGGTCATTTTCCTTTTTTTGGTCCACAACAGAGACCTGATTGGGCTACTTTGATGTGTGCAATTTGTTTTGGTGAGAAGCTTGAGATGCCTGAGAAAGCCTCACAAGAGTTTCAAAGTTTTGTTAACAAGTGTCTTGAGAAGGATTGGAAAAAGAGAGGGACAGTTTTGGAGCTTCTGAATCACCCTTTTGTGAAAAGAAACTCTTGTTCTAAGAAAGGGATGGAGGATTATGTTCTATGTGGGTGA 1029 0.38 MTLVIRERRRKQALSLSLPKKHQIPSSNNFPNKTQMPSLFSSPSSHHGIRSLLDLEKVAVLGHGNGGIVYKVHHKKNYNSFYALKVLRFDQNGIGFRQPPTLEAEILKRADSPYIVRCHAVFYNGDCNGGGGDLSFVMEYMEGGSLYDILQQHHRLPEEVICVLAKSVLEGLNYLHGMNIVHRDIKPSNLLVNEKGEVKIADFGVSHVVEGRFKGNDMNAEGTCAYMSPERFDLERWGGENADEFVGDVWSLGVVMLECLLGHFPFFGPQQRPDWATLMCAICFGEKLEMPEKASQEFQSFVNKCLEKDWKKRGTVLELLNHPFVKRNSCSKKGMEDYVLCG 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00934 342 SUPERFAMILY Protein kinase-like (PK-like) 33 328 IPR011009 -
Car08g00934 342 ProSitePatterns Protein kinases ATP-binding region signature. 61 85 IPR017441 GO:0005524
Car08g00934 342 ProSiteProfiles Protein kinase domain profile. 55 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00934 342 Gene3D Phosphorylase Kinase; domain 1 28 138 - -
Car08g00934 342 PRINTS Tyrosine kinase catalytic domain signature 138 151 IPR001245 GO:0004672|GO:0006468
Car08g00934 342 PRINTS Tyrosine kinase catalytic domain signature 174 192 IPR001245 GO:0004672|GO:0006468
Car08g00934 342 PRINTS Tyrosine kinase catalytic domain signature 247 269 IPR001245 GO:0004672|GO:0006468
Car08g00934 342 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 5 328 IPR045269 GO:0004674|GO:0006914
Car08g00934 342 CDD PKc_MAPKK_plant_like 54 326 - -
Car08g00934 342 SMART serkin_6 55 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00934 342 Gene3D Transferase(Phosphotransferase) domain 1 139 338 - -
Car08g00934 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Car08g00934 342 MobiDBLite consensus disorder prediction 14 33 - -
Car08g00934 342 Pfam Protein kinase domain 56 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00934 342 MobiDBLite consensus disorder prediction 19 33 - -
Car08g00934 342 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 10-LIKE 5 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00934 Car-Chr8 8531610 8532893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00934 1 326 MAP Kinase Kinase Gene Family AT1G32320 51.227 1.39e-100 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Car08g00934 Pkinase 8.2e-59 CL0016