Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00925 ATGGAGCTATTTCCAGCACAACCAGATTTATCTTTGCAAATCAGTCCTCCAAATCCAAACACAACATCAACAACAAAAAGTAATTGGAAGAGAACAACAACAAGAAGTGAAGATGAAATGGATTTGGGGTTTTGGAAAAGAGCTTTGGATTCATCATCATCATCATTGGCTAATAAAATTGATTCTAAAACTTTTGACCTCTCTCTTTCAAATCCAACAAAACCTTCTTTAGATTTCAACAACACTTCTTCCAATAATAACCTCATTCATCATCACTTCCAAAACATtaatcataataataataataataacaataataatGCAAATAACCCTTTTCAATCTTTTCATCAAAACCATTACTTTcatcaacaacaacaacatcatcaaacacttttccaacaacaacaaAGCTTAAGCCAAGAACTTGGTTTTCTTAGACCTATTAGAGGAATTCCTGTTTATCAAAACTCTTCTTCTCCTATGTCATTCTCTCAACTTCATAATCATCATCATGTTCTTGATGGTTCTACTATTACAAACCCTTCTTCAATTTCTAATACCAACACAACTTCAACCCCTTTTCAATCTCAAGCTTCGATGAGGTCAAGATTCTTGTCACGTTTCCCTGCTAAAAGAAGCATGAGAGCTCCAAGGATGCGTTGGACTACTACACTTCATGCTAGATTTGTTCATGCTGTTGAGCTCTTAGGTGGCCATGAAAGGGCTACTCCAAAATCAGTTCTTGAGCTAATGGATGTGAAGGATCTAACATTAGCACATGTTAAGTCACATTTACAGATGTATCGGACGGTGAAAACTACAGATAGAGTAGCTGGTTCATCAGGGCAATCAGATGTATATGATAATGGATCATCTGGAGATAATTCTGATGACATAATGTTTGACATAAACTCTTCAAGAAGATCTGATTTATCCATTAAGCAGCAAGGAAGATCAAGTGTTAATCAAGATAAGGAATGTCATGGACTTTGGAGCAACTCTTCTAGGGAAGCTTGGTTGCATGGTAAACCAAAGTTTGATTCTATTGGAAACATGTCATCTCTTGAGAAGGAAATGGATCCAAAGTGTCTAAGCTATGAGAGAATATCAGATGGAAGTTCATCAACAAACCTATCAAGCCCCAAGAAACCTAATTTGGATTTGGAATTCACCTTAGGGCAGCCTCTATAA 1191 0.3442 MELFPAQPDLSLQISPPNPNTTSTTKSNWKRTTTRSEDEMDLGFWKRALDSSSSSLANKIDSKTFDLSLSNPTKPSLDFNNTSSNNNLIHHHFQNINHNNNNNNNNNANNPFQSFHQNHYFHQQQQHHQTLFQQQQSLSQELGFLRPIRGIPVYQNSSSPMSFSQLHNHHHVLDGSTITNPSSISNTNTTSTPFQSQASMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRVAGSSGQSDVYDNGSSGDNSDDIMFDINSSRRSDLSIKQQGRSSVNQDKECHGLWSNSSREAWLHGKPKFDSIGNMSSLEKEMDPKCLSYERISDGSSSTNLSSPKKPNLDLEFTLGQPL 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00925 396 MobiDBLite consensus disorder prediction 1 35 - -
Car08g00925 396 Gene3D - 216 273 - -
Car08g00925 396 MobiDBLite consensus disorder prediction 368 384 - -
Car08g00925 396 MobiDBLite consensus disorder prediction 11 30 - -
Car08g00925 396 MobiDBLite consensus disorder prediction 275 301 - -
Car08g00925 396 SUPERFAMILY Homeodomain-like 214 270 IPR009057 -
Car08g00925 396 MobiDBLite consensus disorder prediction 365 396 - -
Car08g00925 396 MobiDBLite consensus disorder prediction 179 200 - -
Car08g00925 396 Pfam Myb-like DNA-binding domain 218 269 IPR001005 -
Car08g00925 396 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 395 - -
Car08g00925 396 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 395 IPR044847 GO:0000976|GO:0006355|GO:0010158
Car08g00925 396 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 217 270 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00925 Car-Chr8 8413182 8418737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00925 1 395 G2-like Transcription Factor Family AT4G17695 39.066 5.78e-61 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car08g00925 Myb_DNA-binding 1.9e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00925 - - aprc:113868756 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00925 08 8413182 8418737 Car07g01928 07 22038651 22044927 PCT