Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00922 aTGTATGGTGATTGTCAAGTTATGTCAACAATGGGAGGGAATGTAGTTGTAAACTCAGACACACTCTTCTCTTCTCCGATCCAAAACCCTAACTTCAACTTCATGCAAACAATGCCTTTTCAACCTTTTCCTTCAATGAAAGAAGAAGATGGAATGTTGAGAGGGAAAGAAGAGATAATGGAAAGTGGTTCAGGTAGTGAACAAGTTGAAGATAAGTCAGGGAATGAACAAGAGAGTAATGTTGAACAACAACCTTCAAAGAAAAAACGTTATCATAGACACACTGCTCGTCAGATCCAAGAAATGGAAGCTTTGTTCAAGGAATGTCCACACCCAGATGATAAACAAAGATTGAAACTAAGCCATGATTTAGGGTTGAAACCACGTCAAGTTAAATTTTGGTTTCAGAATCGCCGAACTCAAATGAAGGCACAACAAGATCGTTCAGATAATGTGATACTTAGAGCAGAGAATGAGAGTTTAAAGAATGAGAATTATCGGCTACAATCGGCACTACGTAATATTATTTGTCCTAACTGTGGTGGTCCATGTATCATGGGTGCTGATCTCGGCTTGGATGATCATCAACTTCGACTTGAAAATGCTCGCTTAAGAGAAGAGTTAGAACGTGTATGTTGTATAACATCAAGATATTCTGGTCGACAAATCCAAACAATGGCACCACCACCATCTCTAATGCCACCATCGTTGGATTTAGACATGAACATTTACCCAACAAGACACTTCAATGATCAAATTCCACCTTGTTCACAAATGATTCCTGTCCCTATGTTACATTCTGAACCATCACATTTTCAAGAGGGTGGTCTTTTATTAATGGAAGATGAAAAATCACTTGCTATGGAGCTTGCAGCTTCTTCAATGACTGAGCTTGTTAAAATGTGTCAGACAAATGAACCACTTTGGATTAGGAACAGTGAGAGTGAAAGAGAAGTGCTTAATTTTGAAGAGCATGCAAGGCTTTTTCAATGGCCTTTGAAACTTGAACATAGAAGTGAATTGAGGACTGAAGCTACACGTGATGCTGCTGTTGTTATTATGAATAGTGTTACTCTTGTTGATGCTTTTCTTGATGCTCAAAAATGGATGGAGTTGTTTCCAACAATTGTTGCTAGAGCAAGAACTGTTCAAATTTTAGCTTCTGGTGCTTCTGGACATGCAAGCGGAACTCTTCAGCTGATGTATGCAGAATTCCAAGTTCTTTCTCCATTGGTGTCCACTCGAGAGATTCATTTTCTTCGGTATTGTCAGCAAAATGCTGAAGAAGGAACCTGGGCCATTGTTGATTTTCCTGTTGATAGCTTTCATCAAAATTTTCACAATTCTTATCCTAGATACTGCAGAAGGTCCTCTGGCTGTGTCATTCAAGATATGCCAAATGGCTATTCAAGGGTAACATGGGTTGAGCATGCAAAAGTAGTAGAGAAACCAGTCCATCAAATATTCAGTAACTATGTGTATAGTGGAATGGCATTTGGTGCTCAACGTTGGTTAGGAGTTTTGCAGAGACAATGTGAAAGGGTTGCAAGCCTCATGGCTAGAAACATATCAGATCTTGGAGTGATACCTTCTCCCGAAGCTCGAAAGAATTTGATGAAACTAGCTCATAGGATGATCAAAACTTTTAGTCTTAATATGACAACTTGTGGTGGTCAATCATGGACTGCTATCTCCGATTTACCAGAAGACACTGTTAGAATCACAACTCGGAAAATCACCGAGCCAGGCCAACCTAATGGCGTTATTCTCGCTGCAGTTTCAACCACTTGGCTTCCTTATTCTCATACTAAGATCTTTGATTTCCTTAGAGACGAACGCCATCGTTCACAGATGGATGCTCTTTCTAATGGAAACTCATTAAATGAAGTGGCTCATATTGCAAATGGTTCACATCCAGGAAACTGCATTTCCCTTCTTCGCATAAATGTAGCAAGTAACTCATCTCAGAATGTAGAACTAATGCTGCAAGAGAGTTGCACAGATCAATCTGGAAGTTTAGTAGTCTACACCACAATTGATGTCGATTCGATCCAACTAGCCATGAGCGGCGAGGATCCTTCTTGCATTGCACTTCTTCCACAAGGGTTTATGATAGTGCCAATGGTTTCATCAAATATTGATACATTATCATGCCTTGGAAATTCATCTGATCAAGGTGTCACGGGAACACCATCGTctactactactactactactacCGCTAACTCAGGTTGTCTTCTTATCATGGGAATGCAAGTTCTTGCAAGCACAATTCCTTCTGCAAAGCTTAACCTTTCAAGTGTGACAGCAATTAACAATCATCTCTGCAACACCCTGCATCAAATTGAAAGTGCTCTTTGTGGAAACAATAATAACAATTGCTTTGTTGGTTCTTGCAATGAACCAACTACTAGTGCTGCACCCCCCAAGTAG 2433 0.3958 MYGDCQVMSTMGGNVVVNSDTLFSSPIQNPNFNFMQTMPFQPFPSMKEEDGMLRGKEEIMESGSGSEQVEDKSGNEQESNVEQQPSKKKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSHDLGLKPRQVKFWFQNRRTQMKAQQDRSDNVILRAENESLKNENYRLQSALRNIICPNCGGPCIMGADLGLDDHQLRLENARLREELERVCCITSRYSGRQIQTMAPPPSLMPPSLDLDMNIYPTRHFNDQIPPCSQMIPVPMLHSEPSHFQEGGLLLMEDEKSLAMELAASSMTELVKMCQTNEPLWIRNSESEREVLNFEEHARLFQWPLKLEHRSELRTEATRDAAVVIMNSVTLVDAFLDAQKWMELFPTIVARARTVQILASGASGHASGTLQLMYAEFQVLSPLVSTREIHFLRYCQQNAEEGTWAIVDFPVDSFHQNFHNSYPRYCRRSSGCVIQDMPNGYSRVTWVEHAKVVEKPVHQIFSNYVYSGMAFGAQRWLGVLQRQCERVASLMARNISDLGVIPSPEARKNLMKLAHRMIKTFSLNMTTCGGQSWTAISDLPEDTVRITTRKITEPGQPNGVILAAVSTTWLPYSHTKIFDFLRDERHRSQMDALSNGNSLNEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDQSGSLVVYTTIDVDSIQLAMSGEDPSCIALLPQGFMIVPMVSSNIDTLSCLGNSSDQGVTGTPSSTTTTTTTANSGCLLIMGMQVLASTIPSAKLNLSSVTAINNHLCNTLHQIESALCGNNNNNCFVGSCNEPTTSAAPPK 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00922 810 ProSitePatterns 'Homeobox' domain signature. 120 143 IPR017970 GO:0000981|GO:0006355
Car08g00922 810 SMART HOX_1 86 149 IPR001356 GO:0003677
Car08g00922 810 SUPERFAMILY Bet v1-like 282 516 - -
Car08g00922 810 ProSiteProfiles 'Homeobox' domain profile. 85 145 IPR001356 GO:0003677
Car08g00922 810 CDD START_ArGLABRA2_like 284 513 - -
Car08g00922 810 Gene3D - 290 498 IPR023393 -
Car08g00922 810 ProSiteProfiles START domain profile. 280 517 IPR002913 GO:0008289
Car08g00922 810 SMART START_1 289 514 IPR002913 GO:0008289
Car08g00922 810 PANTHER - 77 794 - -
Car08g00922 810 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 77 794 IPR042160 -
Car08g00922 810 SUPERFAMILY Homeodomain-like 74 146 IPR009057 -
Car08g00922 810 Pfam START domain 290 514 IPR002913 GO:0008289
Car08g00922 810 Gene3D - 72 156 - -
Car08g00922 810 Coils Coil 144 164 - -
Car08g00922 810 MobiDBLite consensus disorder prediction 59 95 - -
Car08g00922 810 SUPERFAMILY Bet v1-like 551 784 - -
Car08g00922 810 CDD homeodomain 88 146 IPR001356 GO:0003677
Car08g00922 810 Pfam Homeodomain 88 143 IPR001356 GO:0003677
Car08g00922 810 MobiDBLite consensus disorder prediction 59 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00922 Car-Chr8 8355641 8362491 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00922 8 786 Homeobox Transcription Factor Family AT5G46880 55.197 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Car08g00922 START 1.3e-37 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00922 - - cam:101514650 1601.26