Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00909 ATGGGCAATAGTGAGATGGATAAATCCGCAAAAGAGAAGGAGTCGAAGACGCCGCCACCAACATCACAGGAGCAAACTTCAACCACCACCAGCACCGGACCTGTTAATCCTGACTGGGCAAGCTTTCAGGCATATTCCCCTATGCCTCCACATGGATTCATGGCATCAAGTCCTCAAGCTCATCCTTATATGTGGGGTGTCCAGCACATTATGCCTCCTTATGGTACTCCACCACATCCCTATGTAATGTATCCCCATGGCGGCATATATGCTCATCCATCCATGCCTCCGGTAATCAATGGATCGTATCCATTCAGTCCTTATGCCATGCCTACTCCAAACGGTATTGCTGAGGCTTCGGGTAACACTCCTGCCAGCATGGAAGCTGATGGTAAGCCTCATGAGGTGAAGGAAAAATTGTCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAACATGATTACTGGGAAAAATAATGAACACAGTAAAACAGCGGGGACATCTACTAATGGAAATCACTCAAAGAGTGGTGAAAGTGCAAGTTTTGAAGGTACTAGTGAGGGAAGTGATGCAAATTCTCAGAATGACTCTCAATTGAAACCCGGGGACAGGCGGGATTCTTTTGAAGGTGAACCATCTCAAAATGGCAGTACAGTGCATACTTCTCAAAATGGGGGACTTAATACAGCTCCTACAGGTGTTAATCAAACTATGTCTATCCTGCCAATCTCTGCGGGTGGTGCTCCTGGAGCTGTTCCTGGTCCCGCAACAAACTTAAATATAGGAATGGAGTATTGGGGCACGCCAACTTCATCTAACATCCCTGCTCTCCGTGGAAAAGTTCCGTCTACTACAGTTGCGGGAGGGATAGTTACTGGTGGATCACGAGATAGTGTTCAGTCACAACTTTGGCTACAGGATGAAAGAGAGCTTAAAAGACAAAGGCGGAAGCAGTCTAATAGAGAATCTGCTCGGAGATCGAGGTTGCGCAAGCAGGCTGAGTGCGATGAGCTAGCTCAGCGTGCTGAAGTTTTGAAAGAAGAAAATGCTTCCCTCCGATTAGAAGTAAGTCGCATTAGAAGCGAGTATGAGCAGCTACTCTCCGAGAACACAGCTCTCAAGGAGAAACTTGGGGAACAACCCGGGAACGATCAGCATGTGCGTAATGATACGCAACAGAGTGGTCAAACAGAGGCTGTACAAGGTGGTCATTAG 1218 0.4688 MGNSEMDKSAKEKESKTPPPTSQEQTSTTTSTGPVNPDWASFQAYSPMPPHGFMASSPQAHPYMWGVQHIMPPYGTPPHPYVMYPHGGIYAHPSMPPVINGSYPFSPYAMPTPNGIAEASGNTPASMEADGKPHEVKEKLSIKRSKGSLGSLNMITGKNNEHSKTAGTSTNGNHSKSGESASFEGTSEGSDANSQNDSQLKPGDRRDSFEGEPSQNGSTVHTSQNGGLNTAPTGVNQTMSILPISAGGAPGAVPGPATNLNIGMEYWGTPTSSNIPALRGKVPSTTVAGGIVTGGSRDSVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLKEENASLRLEVSRIRSEYEQLLSENTALKEKLGEQPGNDQHVRNDTQQSGQTEAVQGGH 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00909 405 MobiDBLite consensus disorder prediction 311 333 - -
Car08g00909 405 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Car08g00909 405 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 316 331 IPR004827 GO:0003700|GO:0006355
Car08g00909 405 MobiDBLite consensus disorder prediction 385 405 - -
Car08g00909 405 MobiDBLite consensus disorder prediction 19 39 - -
Car08g00909 405 Gene3D - 312 366 - -
Car08g00909 405 MobiDBLite consensus disorder prediction 1 43 - -
Car08g00909 405 MobiDBLite consensus disorder prediction 212 234 - -
Car08g00909 405 MobiDBLite consensus disorder prediction 1 18 - -
Car08g00909 405 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 405 IPR044827 GO:0003700|GO:0006355|GO:0043565
Car08g00909 405 SUPERFAMILY Leucine zipper domain 312 368 IPR046347 GO:0003700|GO:0006355
Car08g00909 405 MobiDBLite consensus disorder prediction 116 234 - -
Car08g00909 405 MobiDBLite consensus disorder prediction 146 199 - -
Car08g00909 405 MobiDBLite consensus disorder prediction 375 405 - -
Car08g00909 405 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 311 374 IPR004827 GO:0003700|GO:0006355
Car08g00909 405 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 405 - -
Car08g00909 405 Pfam bZIP transcription factor 309 371 IPR004827 GO:0003700|GO:0006355
Car08g00909 405 Coils Coil 329 377 - -
Car08g00909 405 MobiDBLite consensus disorder prediction 130 144 - -
Car08g00909 405 CDD bZIP_plant_GBF1 314 364 IPR045314 GO:0003700|GO:0006355
Car08g00909 405 Pfam Disordered region downstream of MFMR 138 276 - -
Car08g00909 405 SMART brlzneu 309 373 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00909 Car-Chr8 8195423 8202120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00909 1 399 bZIP Transcription Factor Family AT2G35530 61.017 1.51e-159 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car08g00909 MFMR_assoc 1.9e-55 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00909 K09060 - gmx:778122 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00909 08 8195423 8202120 Car07g01783 07 18595659 18602430 PCT