Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00897 ATGGCAGATAGTTCAGTATCATTTTTATTGGACAAACTATCTGTTTTACTTCAAGAAGAAGTGAATTTACAAAAAGGGGTACGTGAAGATGTTGTATACATCAAAGATGAACTTGAACGCCACAAAGCTCTCTTAATGGTAGCTGATGATGCATTGGAACACAAAGATCCTGAACTCAAAGTTTGGGTTAAAAGGGTTAGAGATATTGCTAATGACATGGAAGATGCTGTAGATGAATATAATTTTCGTCTTGTTGATCAACATGGCAAAAACAACAACAAAAATTCTTCTTTTCATAAGATTTCTTTTGGCATTAAGACCATGAAAGCTAGGCATAAAATAGCTTCAAATATTCAAGGAATCAAATCTAAAGTTGAAGCTATCTCTCATGGACGTCCAAACATATCTGAGGTTCGCACAAGTTCTAGTAAAAGGCTTTCATCAAAGATTGATAGCCAAGGTGATGCCCTGTTGTTAGAGGAAGCTGATCTAGTTGGAATTGAACAACCAAAGAAGCAGCTTAATGATATGCTTTTCAAGGATGAATCAGGTAGAGCTGTGATTTCAATTTAtggaatgggaggtttagggaagactacattagcaaaacaagtctatgatgatCCAAAAGTTCAAAAACGTTTCAGGATTCATGCTTGGGTTAACCTCTCTCAATCTTCCAAGCTGGAAGAGTTATTGAAGGACCTTGTTCAACAGCTCCATAATGTGATTGGAAAACCAGCTCCAGAAGCAGTTGGACAGATGAAAAGTGAGAAGCTGAAAGAGGTTATCAAGAATTTGCTTCAAAGAAGTAGGTACCTAATTGTGCTTGATGATGTTTGGCATGCTAATATATGGGATGCAGTGAAGCTTGCTTTGCCTAACAACGATCGCGGTAGCAGAGTGATGCTTACGACGCGCAAGAAAGATATAGCCTTGTATTCTTGTGCTGAATTGGGTAAAGACTTTCACCTTGAATTCTTACCTGAGCAAGAAGCTTGGTCACTTTTTTGTAGGAAGACATTTCAAGGTGATAACAATTCATGTCCTCCTCATCTTGAAGAAGTTTGTAAGAATATCTTAAAATTGTGTGGAGGGTTGCCTTTAGCAATTGTGGCAATTAGTGGTGTTTTGTCCACAAGAGGAAGGACAAACATAGAAGACTGGCAAATGGTTTGTAGAAGTTTTGGTTCTGAAATTCAAGGCAATGACAAACTTGAGGATATGAAGAAAGTTATTTCCTTAAGTTTCAATGAGTTGCCTTACTATCTTAAATCATGTTTGTTGTATTTAAGTATCTTCCCCGAATTTCATGCTATCGAGCCTATGCGATTGATTCGATTGTGGATAGCTGAAGGATTCATCAATGGAGAAGATGGTAAAACATTGGAGGAAGTTGCAGATAGTTACATTAAGGAGCTTTTGAACAGAAGTTTACTCCAAGTGGTAGGAAAAACCAGCGACGGTCGAATGAAAACTTGTCGAATGCACGATCTTCTAAGGGAAATTGTTAGTTTGAAGTCAAGAGATCAGAACTTTGCAACAATAGCTAAAGATCAGGACATGGTGTGGCCGGAAAGAGTTCGTCGATTATCGGTCATAAATTCGTCGCATAATGTACTATTGCAACAAAATATGACTACATTATTCCAACTTAGGTCTCTGCTAATGTTTGCCTTATCAGATTCACTCAATAGTTTTTCTTTACATGAATTAGGCTCTAATGGTCTTAAGTGGCTTAGGGTGTTAGACTTGCAGGATGCACCTTTGGAAGCTTTTCCTGTTGAAATTGTCAATCTTTACCTTCTCAAGTATCTAAGTTTGAAGAACACAAAAGTGAAAAACATTCCAGGGTCTATTAAGAAGCTGCAATACCTTGAAACATTGAATCTTAAACAAACTTATGTCACTGAATTGCCTGCTGAAATCGCGGAGCTGAAGCGATTACGCCATCTCCTTGTGTATCGTTATGAGATTGAATCCTATGCTTATTTCCATTCAAGGCATGGCTTCAAGGTGGCTGCACCTATAGGAAACATGTTATCTTTGCAAAAGCTTTGTTTTATAGAGGTAGACCAAGGAAGTGGAGCTTTGATGGTTGAGCTAGGAAAACTTACTCAACTTAGGAGACTAGGCATTCGAAAAATGAGGCAAAAAGACGGTGCTGCTTTGTGTTCTTCTATTGAGAAGATGATCAATCTCAGGTCACTTTCCATAACTGCTATAGACGAGGATGAGATAATTGATATTCATGACATTTCTAAGCCTCCTCAGTATCTTCAGCAGTTGTACTTGAGTGGTCGTTTAGAGAAGTTTCCATGCTGGATAAGCTCTCTCAAGAATTTGGTGAGAGTGTTTCTAAAATGGAGCAGGTTAAAGGAGGATCCTCTAGTGTTTCTTCAAGATTTGCCAAATCTAAGACATGTTGAGTTTCTTCAAGTTTATGTTGGTGAGACAATGCATTTCAATGCAAAAGGGTTTCCAAGTTTAAAGGTGTTAGGCCTTGATGATTTAGAAGGATTGAAATCTATGATAATTGAGGAGGGAGCAATGCAAGGTCTTAAAAAGTTGATCATTCAACAATGTGGTTCATTCAAGAATGTACCATTAGGCATTGAACACTTAACTAAGCTAAAAAATATTGAGTTCTTTGATATGCCTAAGGAATTGATTATGGCACTGCGTCCAAATGTAGGGAAAGATTATTGGAGTGTACAAAATGTTCCATCAATTTATTCTTCATATTGGAGAGATGGTGGTTGGGATGTTTATTCATTAGAGACTTTTGGGGAACAAGAGAGTGATTCCAATCATAGTAGTGCAATGAGGAGGAGTCTTGAGGTTCCTACTCTTTGGAAGGTTTAA 2865 0.3707 MADSSVSFLLDKLSVLLQEEVNLQKGVREDVVYIKDELERHKALLMVADDALEHKDPELKVWVKRVRDIANDMEDAVDEYNFRLVDQHGKNNNKNSSFHKISFGIKTMKARHKIASNIQGIKSKVEAISHGRPNISEVRTSSSKRLSSKIDSQGDALLLEEADLVGIEQPKKQLNDMLFKDESGRAVISIYGMGGLGKTTLAKQVYDDPKVQKRFRIHAWVNLSQSSKLEELLKDLVQQLHNVIGKPAPEAVGQMKSEKLKEVIKNLLQRSRYLIVLDDVWHANIWDAVKLALPNNDRGSRVMLTTRKKDIALYSCAELGKDFHLEFLPEQEAWSLFCRKTFQGDNNSCPPHLEEVCKNILKLCGGLPLAIVAISGVLSTRGRTNIEDWQMVCRSFGSEIQGNDKLEDMKKVISLSFNELPYYLKSCLLYLSIFPEFHAIEPMRLIRLWIAEGFINGEDGKTLEEVADSYIKELLNRSLLQVVGKTSDGRMKTCRMHDLLREIVSLKSRDQNFATIAKDQDMVWPERVRRLSVINSSHNVLLQQNMTTLFQLRSLLMFALSDSLNSFSLHELGSNGLKWLRVLDLQDAPLEAFPVEIVNLYLLKYLSLKNTKVKNIPGSIKKLQYLETLNLKQTYVTELPAEIAELKRLRHLLVYRYEIESYAYFHSRHGFKVAAPIGNMLSLQKLCFIEVDQGSGALMVELGKLTQLRRLGIRKMRQKDGAALCSSIEKMINLRSLSITAIDEDEIIDIHDISKPPQYLQQLYLSGRLEKFPCWISSLKNLVRVFLKWSRLKEDPLVFLQDLPNLRHVEFLQVYVGETMHFNAKGFPSLKVLGLDDLEGLKSMIIEEGAMQGLKKLIIQQCGSFKNVPLGIEHLTKLKNIEFFDMPKELIMALRPNVGKDYWSVQNVPSIYSSYWRDGGWDVYSLETFGEQESDSNHSSAMRRSLEVPTLWKV 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00897 954 Gene3D Ribonuclease Inhibitor 537 893 IPR032675 -
Car08g00897 954 CDD RX-CC_like 2 129 IPR038005 -
Car08g00897 954 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 431 IPR027417 -
Car08g00897 954 Gene3D - 5 115 - -
Car08g00897 954 PRINTS Disease resistance protein signature 187 202 - -
Car08g00897 954 PRINTS Disease resistance protein signature 267 281 - -
Car08g00897 954 PRINTS Disease resistance protein signature 364 378 - -
Car08g00897 954 PRINTS Disease resistance protein signature 825 841 - -
Car08g00897 954 PANTHER DISEASE RESISTANCE PROTEIN RP 157 909 IPR044974 GO:0006952
Car08g00897 954 PANTHER DISEASE RESISTANCE PROTEIN RP 1 136 IPR044974 GO:0006952
Car08g00897 954 PANTHER OS08G0539900 PROTEIN 157 909 - -
Car08g00897 954 PANTHER OS08G0539900 PROTEIN 1 136 - -
Car08g00897 954 Pfam Rx N-terminal domain 6 95 IPR041118 -
Car08g00897 954 Gene3D - 423 507 IPR036388 -
Car08g00897 954 Gene3D - 327 421 IPR042197 -
Car08g00897 954 Pfam NB-ARC domain 168 418 IPR002182 GO:0043531
Car08g00897 954 Gene3D - 152 317 IPR027417 -
Car08g00897 954 SUPERFAMILY L domain-like 495 897 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00897 Car-Chr8 8053416 8057433 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00897 165 371 WRKY Transcription Factor Family AT5G45050 24.762 5.71e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00897 K13457 - gmx:100305458 1472.99