Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00894 ATGGCAGCTTGCACTGTCTACTCAACACAATCACTAAGAACAAACATCTCAATTCCAACATCATCATCATCAAAAACACATCTTGGTTTTAATCAAAAACAAGTAGTTTTCTACacaacaagcaaaaaaagcagaaccaacaacaacaaAAGATATTTGATAACATGTAAAGCAGGTGATTCACAGACAATTGTGATTGGTCTAGCAGCTGATTCTGGCTGTGGAAAAAGCACTTTCATGAGAAGACTCACAAGTGTGTTTGGAGGAGCAGCAGAACCACCAAAAGGTGGAAATCCTGATTCAAACACACTTATAAGTGACACAACAACTGTGATTTGTTTGGATGATTATCATTCATTGGACAGAACTGGTAGAAAAGAAAAAGGTGTCACTGCACTTGATCCAAGAGCTAATGATTTTGATCTTATGTATCAACAAGTTAAAGCTATTAAAGATGGAATTTCTGTTGAAAAACCTATTTATAATCATGTCACTGGTCTTTTGGATCCTCCAGAGCTTATTAAACCACCAAAAATCTTAGTCATTGAAGGTCTTCACCCAATGTATGATTCTCGAGTCAGAGATCTTTTGGACTTTAGTATCTACTTAGACATTAGCAATGAAGTGAAATTCGCTTGGAAAATTCAGAGAGACATGGCAGAGCGAGGACATAGTCTTGAAAGTATCAAGGCTAGCATTGAAGCAAGGAAGCCTGATTTTGATGCTTTTATTGATCCTCAAAAGCAATATGCAGATGCAGTGATAGAAGTGTTGCCAACACAACTAATTCCTGATGATAATGAGGGAAAGATTTTAAGAGTGAGGTTGATACAAAAAGAGGGTGTTAAGTACTTTAGCCCAGTTTACTTGTTTGATGAAGGTTCAACCATTTCATGGATACCATGTGGAAGGAAGCTTACATGCTCTTATCCTGGCATTAAGTTCTTCTATGGACCAGATACTTACTTTGGAAATGAGGTGTCAGTTGTAGAAATGGATGGACAATTTGACAGACTAGATGAACTAATATATGTGGAGAGCCATTTGAGCAACCTCTCTTCAAAATTCTATGGAGAAGTAACTCAACAAATGTTGAAGCATGCTGATTTCCCTGGTAGCAACAATGGAACAGGTCTTTTCCAAACCATAGTTGGTTTAAAGATAAGAGATTTATTTGAGCAGATAGTAGCCAGCAGGGCTGAGACTCCAGTAGGAGCTGCAAAAGCTTAG 1230 0.3667 MAACTVYSTQSLRTNISIPTSSSSKTHLGFNQKQVVFYTTSKKSRTNNNKRYLITCKAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYQQVKAIKDGISVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDSRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAFIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKYFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFFYGPDTYFGNEVSVVEMDGQFDRLDELIYVESHLSNLSSKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLFEQIVASRAETPVGAAKA 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00894 409 PRINTS Phosphoribulokinase family signature 70 87 IPR006082 GO:0005524|GO:0005975|GO:0008974
Car08g00894 409 PRINTS Phosphoribulokinase family signature 179 197 IPR006082 GO:0005524|GO:0005975|GO:0008974
Car08g00894 409 PRINTS Phosphoribulokinase family signature 214 231 IPR006082 GO:0005524|GO:0005975|GO:0008974
Car08g00894 409 PRINTS Phosphoribulokinase family signature 232 255 IPR006082 GO:0005524|GO:0005975|GO:0008974
Car08g00894 409 CDD PRK 65 353 - -
Car08g00894 409 Pfam Phosphoribulokinase / Uridine kinase family 65 263 IPR006083 GO:0005524|GO:0016301
Car08g00894 409 PANTHER PHOSPHORIBULOKINASE 7 409 - -
Car08g00894 409 Gene3D - 60 294 IPR027417 -
Car08g00894 409 PANTHER URIDINE KINASE 7 409 - -
Car08g00894 409 ProSitePatterns Phosphoribulokinase signature. 214 227 IPR006082 GO:0005524|GO:0005975|GO:0008974
Car08g00894 409 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 334 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00894 135 255 PRT Gene Family AT3G27190 33.871 2.40e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00894 K00855 - gmx:100777515 744.962