Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00891 ATGGCTGAAAACCTCAACTGTGACATGGCCCAAAACACCATCAATTACCCTCATTGGTATTCATCAAAAACTGGAATTTACAATAGTACACACTCTCGTTTGAATCTTCCAACAGACCCTTTTCTCGACATTGTTTCCTTCATTTTTTCTCACCCTCATGATGGGGTTTTAGCCCTTATTGATTCCTCATCTGGGTCTTCCATTTCTTACTCAAAGTTGTTACCTTTAATCAAATCCATGGCTTCTGGTCTTCACAAAATGGGTGTTTCACAAGGTGATGTCGTTTTGCTTCTACTTCCAAACTCAATTTACTATCCTATTGTACTATTGAGTGTTCTATATCTGGGTGCTGTTATTACACCACTGAATCCTCTTAGTAGTGTTCGAGAAATTCGTAAGCAGGTTAGTGAGTGTAGTGTGAGTTTGGCTTTTACAGTACCTGAAAATGTTAAGAAACTAGAAACAATAAGCATTCCCATTATTGCTGTGCCAGAAAATGAAAAGGATTTGAAGAATGATTGTTTTTCGTGTTTTTTTAACCTGATTTATGGTAACTTTGATTTGCCTCAAAAGCCTGTTATTAAACAAGAAGACACTGCTGGTATATTGTATTCTTCTGGGACTACAGGTGTGAGTAAAGGAGTTGTTTTAACTCATAAAAATCTTATTGCTATGGTTGAACTTTTTGTGAGATTTGAAGCTTCTCAATATGAATACTCTAGTTTGAACAATGTGTATCTAGCTGCTTTGCCAATGTTTCATGTATATGGTTTGTCGCTTTTTGCTGCGGGATTGTTGTCGTTGGGTTCTACAATCATTGTAATGAGGAAATTTGACATTGACAAAGTTATTAGGGTGATTGATAAATATAATGTTACACACTTTGCTGTTGTTCCACCAATGGTGTCGGCATTGACAGCGAAAGCTAAAGATGTTAATGGAAGTAAGTTGCAGAGTTTGAGACAGGTTTCCTGCGGTGCAGCGTCTTTGAGCGCAGGAATTATCAACGATTTTGTCCAAGCTTTTCCAAATGTTGATTTTATACAGGGTTATGGAATGACTGAATCGACGGCAGTAGGAACACGCGGCTTCAATACGGAAAAGTTTCGCAACTGTTCTTCAATAGGGTTGTTAGCTCCAAACATGGAGGCAAAAGTGGTAGATTTTAATTCTGGTGAATTTTTGCCTCCAGGTAGCAGCGGTGAGCTTTGGTTGAGAGGGCCTTCAATTATGAGAGGATACTTGAATAATGAGGAAGCTACAATGTCGACAATTGATGAAGATGGTTGGCTACATACTGGAGATATTGTTTATTTTGATCAGAATGGATATTTATATTTGTCTGACCGCTTAAAAGACATTATCAAATTCAAGGGCTTTCAGATTGCTCCTGCTGATTTAGAAGCTCTGTTAATTTTGCATCCTGAAATAGTTGATGTTGCTGTTACAGGTGCCAAGGATGAAGAAACTGGAGAGATTCCAGTGGCATTTGTAGTAAAAAAGGCTGGAAGCGTACTTTCTTCGAAGCATGTTATCGATTACATTGCTGAGCAGGTTGCTCCATACAAGAAGGTCCGAAAAGTGGTCTTCACTGACAAGATACCGAGGACTCCGGCAGGGAAGATCCTTCGAAAGAACCTCAGGAATTGCCTGACTTCTAAACTCTAA 1668 0.3879 MAENLNCDMAQNTINYPHWYSSKTGIYNSTHSRLNLPTDPFLDIVSFIFSHPHDGVLALIDSSSGSSISYSKLLPLIKSMASGLHKMGVSQGDVVLLLLPNSIYYPIVLLSVLYLGAVITPLNPLSSVREIRKQVSECSVSLAFTVPENVKKLETISIPIIAVPENEKDLKNDCFSCFFNLIYGNFDLPQKPVIKQEDTAGILYSSGTTGVSKGVVLTHKNLIAMVELFVRFEASQYEYSSLNNVYLAALPMFHVYGLSLFAAGLLSLGSTIIVMRKFDIDKVIRVIDKYNVTHFAVVPPMVSALTAKAKDVNGSKLQSLRQVSCGAASLSAGIINDFVQAFPNVDFIQGYGMTESTAVGTRGFNTEKFRNCSSIGLLAPNMEAKVVDFNSGEFLPPGSSGELWLRGPSIMRGYLNNEEATMSTIDEDGWLHTGDIVYFDQNGYLYLSDRLKDIIKFKGFQIAPADLEALLILHPEIVDVAVTGAKDEETGEIPVAFVVKKAGSVLSSKHVIDYIAEQVAPYKKVRKVVFTDKIPRTPAGKILRKNLRNCLTSKL 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00891 555 Gene3D - 26 452 IPR042099 -
Car08g00891 555 CDD 4CL 36 547 - -
Car08g00891 555 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 14 554 - -
Car08g00891 555 Pfam AMP-binding enzyme 56 457 IPR000873 -
Car08g00891 555 ProSitePatterns Putative AMP-binding domain signature. 202 213 IPR020845 -
Car08g00891 555 Pfam AMP-binding enzyme C-terminal domain 467 541 IPR025110 -
Car08g00891 555 Gene3D - 453 553 IPR045851 -
Car08g00891 555 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 14 554 - -
Car08g00891 555 SUPERFAMILY Acetyl-CoA synthetase-like 53 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00891 Car-Chr8 7985667 7989242 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00891 15 555 Monolignol Biosynthesis Gene Families AT4G19010 60.589 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00891 K01904 - gmx:100804808 870.152