Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00890 ATGTCAACAATTGATAGAGATGGTTGGCTATATACTGGAGATATTGTTTATTTTGATCAGAATGGATATTTACATTTGTGTGATCGCTTGAAAGACATGATCAAATACAAGGGCTTTCAGATTGCTCCAGCTGATTTAGAAGCTGTGTTAATTTTGCATCCTGAAATAGTTGATGTTGCTGTTACAGCTGCCAAGGATGAAGAAACTGGGGAGAAGGCTGGAAGTGTACTTACGTCGAAGCTTGTTATCGATTATGTCGCTGAGCAGGTTGCTCCATACAAGAAGGTTAGGAAAGTGGTCTTCACCGACAAGATACCGAGGTCTCCGACGGGGAAGATCCTCCGAAAGCAACTCACGAATTGCTTATCTTCTAAATCTAAACTCTGA 387 0.4109 MSTIDRDGWLYTGDIVYFDQNGYLHLCDRLKDMIKYKGFQIAPADLEAVLILHPEIVDVAVTAAKDEETGEKAGSVLTSKLVIDYVAEQVAPYKKVRKVVFTDKIPRSPTGKILRKQLTNCLSSKSKL 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00890 128 Pfam AMP-binding enzyme 4 36 IPR000873 -
Car08g00890 128 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 125 - -
Car08g00890 128 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 1 125 - -
Car08g00890 128 Gene3D - 2 31 IPR042099 -
Car08g00890 128 Pfam AMP-binding enzyme C-terminal domain 46 112 IPR025110 -
Car08g00890 128 Gene3D - 32 126 IPR045851 -
Car08g00890 128 SUPERFAMILY Acetyl-CoA synthetase-like 4 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00890 Car-Chr8 7982810 7983650 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00890 3 125 Monolignol Biosynthesis Gene Families AT4G19010 59.259 4.27e-48 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00890 K01904 - gmx:100804808 201.06