Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car08g00884 | ATGAGAATAGAGGTTCAAGGGAAGTATTTGCAGGCAGTGTTAGAGAAAGCACAAACTAATTTTTCTCAAGATGGACAAGGCAATCTTGAAGCATCAAAAGTTCAATTAGATGAATTCAACTTAGCTTTGTCAAATTTCATGGAAAATATGAATAATAAAGATAGTAAAGAAAACATAGTAGGCATGAGTGAATATTATGATAAGAATCATAGCTCATCTTTCAATTATCAAGAAGTACTAGGGGAAGAAGAAAAGAAGGATCTAAAACCTCAAGTTGAAGGGGGTTCAATACAGCTAGACTTAAACATCAAGGGTAATGAAGTTGCATATGCAAATGGAGCTGAAATGGAATCAAAGATGGTTTCATATAGGGTATACCATTTTTGA | 387 | 0.3333 | MRIEVQGKYLQAVLEKAQTNFSQDGQGNLEASKVQLDEFNLALSNFMENMNNKDSKENIVGMSEYYDKNHSSSFNYQEVLGEEEKKDLKPQVEGGSIQLDLNIKGNEVAYANGAEMESKMVSYRVYHF | 128 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car08g00884 | 128 | PANTHER | OS02G0700300 PROTEIN | 1 | 113 | - | - | |
| Car08g00884 | 128 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 1 | 113 | IPR044848 | GO:0003700 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Car08g00884 | Car-Chr8 | 7922448 | 7922834 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Car08g00884 | 1 | 104 | G2-like Transcription Factor Family | AT5G45580 | 34.579 | 2.84e-08 | 48.5 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car08g00884 | - | - | cam:101515507 | 246.899 |