Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00872 ATGGATGCTTCAAACTCTCCCTTGAGACTAGAACATATACCTTCCAAAGGTAAAGGCCTTATAGCAACAAAACCTCTCAAAGCTGGCCAAATTGTCCTCACTGAATCCCCTCTTCTTCTCTACTCTGCTTCACCTCTCTTCTCTCAACCTTCTTATTGTGACAATTGCTTCAGAACCTTACCAACACAAACTATTCCATGTCCTTCTTGCTCTCATTGCAAATTCTGCAGCCAAAAATGTCTCTATATTGCTCTCAACTCCTCTCACTCTTCTTGGTCATGTCAAACACTCTCATATCTTCAAAATAAAACTTCACCTTTATCTACACAACCCTTTGAAATCCAAGTTCAAGCTCGTTTCATTGTTGCTGTTTACAATCTTTTAATGCATAACCCTTCTCATCTTAATATTTTGCTTTCTCTTCACGGTGATCCAAATGAAGCTATACTTGATTCTGCTAAGTTTCTTCATTCTCTTGTTTCACCATTTTGTCAAAAAAACATGATTTTTTCAGATGAACTAGCTGCTAAACTCATTGCTAAAGAAAGAATCAATTCTTTTTGCTTAATGGAACCTTATTCTCAAAAGGGTCCTCAAAGATCCATAAAGGGTTATGGAATTTATCCAAAAGCTACTTTTTTTAACCATGATTGTATTCCTAATGCTTGCAGGTTTGATTATGTGGATAGTAGTGATGAAAATAATACTGACATTGTTATCAGGTTGATTAAGGATGTTGATGTTGGAAGTGAGGTTTGCATAAGCTATTTTAGGATTAATAAGGATTATTCATCAAGGAAGAGGATTTTGATGGAGGATTATGGTTTTGCTTGTGAGTGTGATAGGTGCAAGATTGAAGCTAATTGGAATGATGATGGAGAGAGTAAAAGTGATTTGCCACATGTGTGTTTTTTATCTAAGTATGTTTGTGATAAGAAGAATTGTGCAGGAACTATGGCTCCTCTGCCTCCTAAAGATGATGAAGCTTCTAATGTTCTTGAGTGTAACTTTTGTGGTAATTTGAAAGTTGACAATGCTACTTAG 1044 0.3592 MDASNSPLRLEHIPSKGKGLIATKPLKAGQIVLTESPLLLYSASPLFSQPSYCDNCFRTLPTQTIPCPSCSHCKFCSQKCLYIALNSSHSSWSCQTLSYLQNKTSPLSTQPFEIQVQARFIVAVYNLLMHNPSHLNILLSLHGDPNEAILDSAKFLHSLVSPFCQKNMIFSDELAAKLIAKERINSFCLMEPYSQKGPQRSIKGYGIYPKATFFNHDCIPNACRFDYVDSSDENNTDIVIRLIKDVDVGSEVCISYFRINKDYSSRKRILMEDYGFACECDRCKIEANWNDDGESKSDLPHVCFLSKYVCDKKNCAGTMAPLPPKDDEASNVLECNFCGNLKVDNAT 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00872 347 ProSiteProfiles SET domain profile. 6 257 IPR001214 GO:0005515
Car08g00872 347 Gene3D - 109 186 - -
Car08g00872 347 CDD SET_SMYD 185 283 - -
Car08g00872 347 Gene3D SET domain 19 284 IPR046341 -
Car08g00872 347 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 1 346 - -
Car08g00872 347 SUPERFAMILY SET domain 8 279 IPR046341 -
Car08g00872 347 Pfam SET domain 17 256 IPR001214 GO:0005515
Car08g00872 347 Gene3D - 52 103 - -
Car08g00872 347 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 1 346 IPR044238 -
Car08g00872 347 SMART set_7 6 263 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00872 Car-Chr8 7803060 7804465 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Car08g00872 SET 2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00872 - - cam:101515628 725.702