Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00870 ATGTTTGAATGCATAAGATGTACGAAGCAAGCGGCGGAAGAAGAGGCTGAAGAAGTCCGTCAGAGTGGCACGCCGACCAGAAAAGAAGCCGTCAAAAGCCTGACTGCTCAGATAAAGGATATAGTGCTGAAGTTTTCAGGTGCATACAAGCAACTCAAACCCTCCTCCTGCACAGGAACAAGTTCCTACAGAAAAGGACTGAGATCATCATATGCTGATTCTGAAGCTAACTCAGAAGGGGTTCAATACCCTTATATGGGAGGTGTAAGCTCAGGTTCAACTCCTCCTTGTGACTTACGTGAAAATTTCACTGGTGGAAGAACAGAACAAAGATTCATAGGCTCAACCAGTGGTGTCCAAACCACTACTACTACAGTGCATGAGCCAGTAGTGCCAGAACCTGAAGCTGTGGTGGAGGAAGAAAAAGAAGAAACCAAAGTGTGGGTGGCACAGGTTGAGCCAGGGGTTGACATAACCTTTGTGGCTCTTCCTAATGGTGCAAATGATCTCAGAAGAATTCGCTTCAACCGAGAAATGTTTGACAAATGGCAAGCTCAAGTGTGGTGGGGTGAGAACTATGACAGGATCAGAGAGCTTTACAATGTACAGAAATTCAACCGAACAGCTCTTAACACTCCTCCAGCATCTGAGGATGAGCAAAGAGATTCTTCTCACTCAAGACAACTATCTGGACAAGATAGTCCTGTGGCTGCTTGGTTGAACAATGATTCAACACAGAGGAATCAGTACTATAATCAACCTTCTGAAATGACTATGTATCAAGGAAACAATGTTCAAAACATGCATGCAGCTGGGTCATCAAGGACTTTTTATAAAGATGAGTTTTCCTTCAGCAATTTCAGTGAAATTGAGTCAGAATGGATTGAACAAGATGAGCCTGGAGTGTTTGTTACCATCAGGCAGTTTCATGATGGGAGCAAGGAGCTTCGCCGCGTCAAATTCAGCCGACAGAGGTTTGGAGATGAAGCAGCCAGGAAATGGTGGGAAGAGAACAGAGAGAGAATTCAAGCTCAATACCTATGA 1044 0.4444 MFECIRCTKQAAEEEAEEVRQSGTPTRKEAVKSLTAQIKDIVLKFSGAYKQLKPSSCTGTSSYRKGLRSSYADSEANSEGVQYPYMGGVSSGSTPPCDLRENFTGGRTEQRFIGSTSGVQTTTTTVHEPVVPEPEAVVEEEKEETKVWVAQVEPGVDITFVALPNGANDLRRIRFNREMFDKWQAQVWWGENYDRIRELYNVQKFNRTALNTPPASEDEQRDSSHSRQLSGQDSPVAAWLNNDSTQRNQYYNQPSEMTMYQGNNVQNMHAAGSSRTFYKDEFSFSNFSEIESEWIEQDEPGVFVTIRQFHDGSKELRRVKFSRQRFGDEAARKWWEENRERIQAQYL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00870 347 MobiDBLite consensus disorder prediction 227 243 - -
Car08g00870 347 ProSiteProfiles BRX domain profile. 146 201 IPR013591 -
Car08g00870 347 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 347 IPR044532 -
Car08g00870 347 Pfam Transcription factor BRX N-terminal domain 24 54 IPR027988 -
Car08g00870 347 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 347 - -
Car08g00870 347 ProSiteProfiles BRX domain profile. 292 347 IPR013591 -
Car08g00870 347 Pfam Transcription factor regulating root and shoot growth via Pin3 147 200 IPR013591 -
Car08g00870 347 Pfam Transcription factor regulating root and shoot growth via Pin3 291 346 IPR013591 -
Car08g00870 347 MobiDBLite consensus disorder prediction 210 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00870 Car-Chr8 7779107 7783899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00870 1 347 Major Intrinsic Protein MIP AT1G31880 50.843 3.53e-107 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00870 - - gmx:100809614 400.208