Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00857 ATGGAATCCAGTGACCAAGAGAGCGTGTCGTCGGTAAGAGAGGTTCATGCAAATGGAAGCCGCATGGCTGCATCAGAAGTTGAGGCAAAGCTTGATGAAGGAAATATTCAAGAGGCAGAATCGGCATTGCGAGAAGGGTTGTCACTCAATTTTGAGGAAGCAAGGGCTCTTCTTGGGAAGTTGGAGTATCAGAGAGGTAATGTAGAAGGTGCTCTCCGTGTCTTTGATGGGATTGATCTCCATGCTGCCATCCAGCGGCTGCAACCCTCCTTTTCTGAAAAACCACCTGTCAAAAAAAGTCGCCCTCGCACAGAATCACCTTCTTCGGTCTCTCAGCATGCTGCTAGTTTGGTGCTTGAAGCCATCTACTTAAAAGCCAAGTCTCAACAAAAACTCGGGAAATTTGCTGAAGCTGCTAATGACTGTAAACGTATTCTTGACGCTGTTGAGAAGATATTTTATCAGGGTATACTTGATTTTCAAGTGGACAGTAAATTACAAGAGATAGTGAGCCATGCAGTAGAGCTCCTTCCAGAGCTTTGGAAACAAGGTGGTTACTACGACGAAGCAATCTCTGCTTACAGACGTGCCCTTCTTAGTCAGTGGAACCTCGATAATGATTGCTGTTCAAGAATTCAGAAATCGTTTGTTGTTTTTCTGCTGTACAGTGGTGTGGAGGCAAGTCCGCCTAGTTTAGCAGTTCAGATCGAAGGTTCTTATGTACCTAAAAATAATCTCGAAGAGGCGATTCTGCTTTTAATGGTTCTTATAAGAAAGTTTTGTTTTGGTAAGATAAAATGGGATCCTTCGATCATGGAACACCTAACTTTCGCGCTTTCTGTATGTAGCCAAACTTCCGTTTTAGCAAAGCAATTTGAAGACTTGGTACCTGGCGTATACCATCGTATTGATCGTTGGAATTCTTTAGCTTTATGTCATTGTGGAGCTGGACAAAATGTCAGTGCTTTGAATCTGCTTAGGAAGTCCTTGCACAAACACGAACGACCGGATGACCTTACATCGTTATTATTAGCTGCTAAGATATGCAGCGAGGATCCTTATCTTGCTGCCGAGGGAGTGTGCCATGCACAGAGGGCAATCATTAATGCTCATGGTCCAAACGAGCATTTAAAAGGTGTTGCTCTTCGAATGTTGGGACTTTGTCTTGGAAAGCAAGCTAAGGTTGCTTCCTCGGACTTCGAAAGGTCTCGCCTTCAGTCCAAGGCTCTCGAGTCGTTGGAGCAGGCAGTTAGATTGGAGAGAAACAATTCTGATCTGATTTTTGAGTTGGCTGTTCAATATGCCAAGCATCGGAATTTGGTCGCTGCTTTGCGCTCCGCACGGCATTTCTTTCATGAAACCGGCGGCTCTATAGTGAAATCTTGGATATTGCTTGCTCTGATTTTGTCTGCGCAACAAAGATTTTCGGAAGCTGAAGTGGTGACCGATGCTGCTTTAGATCAGATTGCAAGATGGGAGCAGGGGCCTCTGCTTAAGCTTAAAGCAAAGCTGAAAATCTCCCAATCAAAACCTATGGATGCTATTGAAACTTATCGCCACCTTCTTGCATTGGTTCAAGCCCAGAGGAAATCCTCTGGATCTTTCCGAGTTGGTTCGAAGATTGAAGATGATAAAGTGAATGAATTTGATATTTGGCACGGTTTGGCAAATTTATATGCTAGCCTTTCTCATTGGAAGGATGCTGAAATCTGTTTGCAAAAGGCCAAAGAGTTGAAGGAGTACTCTGCAGCAATTTTGGCCACTGAAGGTATTTTGTTCGAAGGACGTGGAAAAAATCAAGAAGCTCTGAATGCTACTATTAATGCAATACTACTTGAACCAAACCATGTTCCTAGCAAAATCTTAATGAGTGCTTTGGTTCAGAAAATGGGTTCAAAGGCTTTGTCTGCTGCAAGAAGCATGCTCTCTGATGCGCTTAGAATCGAACCGACCAACCGCATGGCTTGGTATTACTTGGGATTGGTTCACAAGCACGATGGCCGAGTGGGTGATGCTGCCGACTGCTTCCAGGCAGCTTCCATGCTGGAAGAATCCGATCCCATCGAAAGTTTCAGCACCATACTTTGA 2088 0.4425 MESSDQESVSSVREVHANGSRMAASEVEAKLDEGNIQEAESALREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLHAAIQRLQPSFSEKPPVKKSRPRTESPSSVSQHAASLVLEAIYLKAKSQQKLGKFAEAANDCKRILDAVEKIFYQGILDFQVDSKLQEIVSHAVELLPELWKQGGYYDEAISAYRRALLSQWNLDNDCCSRIQKSFVVFLLYSGVEASPPSLAVQIEGSYVPKNNLEEAILLLMVLIRKFCFGKIKWDPSIMEHLTFALSVCSQTSVLAKQFEDLVPGVYHRIDRWNSLALCHCGAGQNVSALNLLRKSLHKHERPDDLTSLLLAAKICSEDPYLAAEGVCHAQRAIINAHGPNEHLKGVALRMLGLCLGKQAKVASSDFERSRLQSKALESLEQAVRLERNNSDLIFELAVQYAKHRNLVAALRSARHFFHETGGSIVKSWILLALILSAQQRFSEAEVVTDAALDQIARWEQGPLLKLKAKLKISQSKPMDAIETYRHLLALVQAQRKSSGSFRVGSKIEDDKVNEFDIWHGLANLYASLSHWKDAEICLQKAKELKEYSAAILATEGILFEGRGKNQEALNATINAILLEPNHVPSKILMSALVQKMGSKALSAARSMLSDALRIEPTNRMAWYYLGLVHKHDGRVGDAADCFQAASMLEESDPIESFSTIL 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00857 695 MobiDBLite consensus disorder prediction 1 25 - -
Car08g00857 695 SMART tpr_5 653 686 IPR019734 GO:0005515
Car08g00857 695 SMART tpr_5 549 582 IPR019734 GO:0005515
Car08g00857 695 SMART tpr_5 303 336 IPR019734 GO:0005515
Car08g00857 695 SMART tpr_5 495 528 IPR019734 GO:0005515
Car08g00857 695 SMART tpr_5 459 492 IPR019734 GO:0005515
Car08g00857 695 SMART tpr_5 119 152 IPR019734 GO:0005515
Car08g00857 695 SMART tpr_5 583 616 IPR019734 GO:0005515
Car08g00857 695 MobiDBLite consensus disorder prediction 1 15 - -
Car08g00857 695 Gene3D Tetratricopeptide repeat domain 459 691 IPR011990 GO:0005515
Car08g00857 695 Coils Coil 402 422 - -
Car08g00857 695 Gene3D Tetratricopeptide repeat domain 12 203 IPR011990 GO:0005515
Car08g00857 695 Gene3D Tetratricopeptide repeat domain 273 455 IPR011990 GO:0005515
Car08g00857 695 PANTHER PROTEIN NPG1 1 694 IPR043376 -
Car08g00857 695 SUPERFAMILY TPR-like 31 200 IPR011990 GO:0005515
Car08g00857 695 MobiDBLite consensus disorder prediction 91 110 - -
Car08g00857 695 PANTHER CALMODULIN-BINDING PROTEIN 1 694 - -
Car08g00857 695 SUPERFAMILY TPR-like 119 443 IPR011990 GO:0005515
Car08g00857 695 SUPERFAMILY TPR-like 497 683 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00857 Car-Chr8 7692304 7698431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00857 12 695 Calmodulin-binding Proteins AT2G43040 71.512 0.0 971
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00857 K21843 - gmx:100814609 1167.91