Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00850 ATGGGATATGATTCGGATAGCCCCTCACAAGATGGGAGGGATGAAGATGACGAAGAAGAATACGAGGAGTCTGACAAGGGTAGTTGTTTTCTTGGGTTCATGTTTGGAAATGTCGATAACTCTGGTGATCTTGATGTTGATTATCTTGATGAGGATGCAAAGGAGCATCTTTCTGCATTGGCTGACAAGCTGGGTCCATCACTGACAGATATAGATTTGTCAGGAAAATCACCACAAACACCACGTGGCGTTGTTGAACAAGACTGTGGTGAAAAGGCTGAAGATGCAGTTGATTACGAAGATATTGATGAAGAGTACGATGGTCCTGAGACTGAAACTGCCAATGAGGAGGACTATTTGTTGCCAAAAAAGGATTTTTTCGCTGCCGAAGCCTCTCTTGAAGTGTTGGCGTGCAAAACTTCTGTCTTTGATGATGAAAATTACGACGAAGAATCTGAAAATGAAGAAGACTTCGTGAATAATGATGCTAAAGTCAATAACATCTCTTTAGCTGTAGAGCAGGAAGAGAGCTTTGTAGATGCATCTAAAGGAGAGAGTGCTTTTGAGGATGATTTACAAGTTGGCTCACCGCAGACTGAAGAATTGGACATTGATGGTCAAAAACCCGAGGTAGGAGGACCTGATGTTTTGAAAAGGTCTATGGCTACACCGTTGCCTGTATTGTATGTGGAAGATGGAAAGGCAGTTTTACGCTTCTCCGAAATCTTTGGTATTCAGGAACCTCATCGAAAGGGAGAAAAGAAAGAGCATAGATTCAAGTCTTTGGATTTATCTGATGATATTGTAGAAGAGGATGAAGAGGAGTTTCTTAAAAGCTTCTCTCAGAGTCTCACACTTACGAAACAGGTTTCTGTAGTACATACTGACGTATCAGAAAACAATAATGTTGACTTGGAATTTCCAAAATTTGGATTTCTTCACGCGGATGCCTCACTTACTGCGAAAGATGATCGGCAACCAAAGGACTCTTGTCTTAGTGGCGAACCAATGAAAGAGGATTTTGCAGAAGATTTTTCCTGGAAAGATCATCCCCTCATGCTAGCCAATTTCTATCCTCTTGATCAGCGAGACTGGGAAAATGAAATCCTTTGGGGCAATTCTCCTGTTACAAGTGACAATAATGTTGAGAGCTGTGAAATTTCTGGACCTGAAATGAGAGCTTCTGGTGGTGGTGACCTAGAAATTGAAAGTGGGATACAGAACTTTCAATCAGTGCCCCAGAAGATACTGGAGGAGAAAGATCGAAATGTATTCACGTGCTGCTCTCCTGTTTCACTGGATCCCTTTGACTCAAGAGATTCAAATGGTGCTAAAACCAATTCAATATCCCAAAGTCTATTTCATCCCCAACTTTTGAGGCTAGAAGTGGACGGTTCTCATCTTGCAGATGGAAGAGGAGCGGATATATCTGAGATGCATAATCAAAGTGGTCAAGTAAAGCGTTTGACCAAGGTTATGTCACAAAACAGAGATCTCATGGATGACTCGTGGATAGACAAGATAATGTGGGGCGAGCATGACCAGCCTAAGATGAAATCAAAGCTTATTTTTGATCTTCAGGATAATCAAATGCACTTTGAAGTTTTGGATAGCAAGGATGGCACTCATCTTCGCCTTCATGCTGGGGCTATGATTTTAACTCGCTCTTTGAAATCAATTAGCGTGGACTCTTCTGAGCTATCGGGACAGGGAGGTCAGTATGGATGGAGATACGTTGCTAATGACAAACACTATTCAAACCGGAAAACTTCTCAGCAACTGAAATCAAACTCGAAAAAACGCTCAGCTCATGGTGTCAAAATTTTTCACTCGCAACCTGCACTGAAGCTGCAGACCATGAAATTGAAGTTGAGCAATAAAGATATTGCAAATTTTCACCGGCCTAAAGCAATATGGTATCCCCATGACAATGAGGTGGCTGTTAAAGAACAAGGAAAATTACCAACACACGGGTCCATGAAAATTATTATGAAAAGCTTGGGTGGCAAGGGGTGTAAACTGCATGTTGATGCTGAAGAAACTCTCTCTTCTGTTAAAGTAAAAGCTTCTAAAAAGCTAGATTTCAAGGCATCAGAAACAGTGAAAATATTTTATTTAGGTAGGGAGCTTGAAGATCAAAATTCACTCGTTGCACAAAATGTTCAGCCAAACTCCTTGTTACATCTTGTTCGTACAAAGATACAGTTGTGGCCTAGAGCACAAAGGGTTCCTGGTGAGAACAAGTCCTTGCGTCCTCCGGGAGCATTCAAGAAAAAATCTGATATGTCTGTAAAAGACGGACATGTTTTTCTTATGGAGTATTGTGAAGAAAGGCCTTTACTTTTGAGTAATGTTGGAATGGGAGCAAGACTGTGTACATATTATCAAAAGAGTTCGCCAGATGACCAATCTGGTTCCTTATTACGCAACACAAATAGTAGCGTGGGGCATGTTATTTCTCTGGACCCTGCTGATAAATCTCCTTTTCTTGGGGATTTAAAACCTGGTTGCAGTCAGTCATCACTTGAGACAAATATGTATAGAGCACCCATATTTACTCATAAAGTTCCATCAACTGACTACCTGCTGGTTCGTTCTTCAAAGGGAAAGCTATCATTAAGGCGCATTGATAAAATTAATGTTGTTGGACAGCAGGAACCTCTCATGGAGGTGTTTTCACCTGGAAGTAAAAATCTTCAGACTTTCTTGATGAACAGGATATTGGTACACATGTGCCGTGAATTCCAAGCAGCAGAGAAGCGACACTTGTCTCCATACATTCGCATTGACGATTTTCTTTCGCAGTTTCCTTACCTATCAGAAGCCTCATTCCGTAAGAGGATCAAAGAATATGCCAATTTACAGAGGGGTGCAAATGGACAGTCAATTTTTGTTAAAAAGCGAAATTTCCGCATGTGGTCGGAAGATGAATTGAGAAAAATGGTGACACCAGAGCTTGTTTGTGGCTATGAAAGTATGCAAGCTGGCCTCTACCGCTTAAAACATTTAGGAATAACTGAAACACATCCTAATAATATTTCATCTGCAATGAGTCGTCTTCCTGATGAAGCAATAGCGCTGGCTGCTGCGTCACACATTGAGAGGGAACTGCAAATTACTCCTTGGAACTTGAGTAGCAATTTTGTGTCCTGTACAAGCCAGGGTAAGGAAAATATTGAACGGATGGAAATTACTGGTGTTGGTGATCCATCAGGTCGCGGCTTGGGTTTTAGCTATGCTCGGGCACCTCCAAAGGCACCAGTGTCTAGTGCAATGGTGAAGAAAAAAGCGGCTGCTGGCCGGGGAGGTTCAACTGTTACTGGTACAGATGCTGATCTACGTAGATTAAGCATGGAGGCTGCACGAGAGGTACTTCTTAAGTTCAATGTTCCTGAGGAAGTCATTGCAAAGCAAACCAGATGGCATCGCATTGCTATGATACGCAAACTTTCAAGTGAGCAAGCTGCGTCTGGGGTTAAGGTTGATCCAACGACAATAGGAAAATATGCTCGTGGCCAACGAATGTCCTTTCTTCAGTTACAGCAGCAGACCAGAGAGAAGTGTCAAGAGATTTGGGATCGACAAGTTCAGAGTTTGTCAGCTTTAAATGGTGATGATAATGAGAGTGATTCAGAAGGGAATAGTGATCTAGATTCTTTTGCTGGAGATCTGGAGAATTTGCTTGATGCTGAGGAATTTGAAGAGGGAGAAGAAGCTACTAATGACTTAAAACGTGATAAGGGAGATGGTGTTAAGGGTCTTAAAATGAGAAGACGAACAACCTTGGCCCAGGCAACAGAGGAAATGGAAGATGAAGTAGCCGAGGCCGCTGAATTGTGCAGGTTGCTTATGGATGATGATGAAGCTGACAAGAAGAAAAAGAAGAAAGCCAGGGTTATGGTGGATGCAAGACGATTGATACCAAAATTGCAATCAAAATTTATCTTTGACAACACTGAACCAGTAAAGCAAATAACAAATGTATTGCAACTTGATGGAACTAATCATTTTAAGGAGGATGCAACTACAGATCACAGGGAGGAGGAAAACTTTTCTGCTAAAAAAAGCAAATCAGTGAAGGTCAATAAAGCAAAGAAGAATGAGATTTCACCTATTAGTCTACCTAATAAAAAAATTAAATTAAATATGGGAGAAGGAAGAAAGAACCAGGTATTTAAGGAGAAAAAACCATCAAGGGAAACTTTCGTTTGTGGAGCATGTGGCCAGCTTGGGCACATGCGTACGAACAAGAACTGTCCGAAATATGGTGAAGATCTAGAGGCACAACTTGAATCTACAGACATGGAAAAATCAATTGGAAAATCCAGCTTTGTTGATCCCTCTAGCCAGTCCCAGCATAAACTCACCTCCAAAAAGCCGATATCAAAAATCACAACAAAAGTTGCTCCAGTTGATAATTCAACAAAAATTCCATTGAAGTTCAAATGCAGTTCCACAGAGAAATCTTCTGATAGACCTGCAATAGAAACGCTACAGAGTGCTGACAAACCAGTCACTTCTGACTCAGAAACTGCTAAGTCTGCCAAGATTAATAAGATAATTATTCCTAACAAGGGGAAATCAGATGATACGCAGGCTGAATCTCTTAAGCATGCTATTGTTATACGCCCTCCTACTGATTCAGGTAGAGGTCAGGTTGATTCTCATAAGTTCCCAATTAAAATCCGCCCGCCTGCAGAAATTGATAGGGAGCAAAGTCACAAAAAGATAATTATAAAACGTACAAAGGATGTTGCTGATCTGGAGCTTGACAGTCCTGGTGGAAACACTGGACTTGAACACAGAAAAACTAAAAGAATTGTGGAATTGGCGAATTTTGAGAAGCACAGAAAGCAGGAGATGATGTATTCAAGTGAGAGTTTGGTAAAATGGAATGCTAAAGAAGATAGAAGATGGTGGGAAGAGCAAGAGAAACGAAGAAATGAAGTGAGACTCAGAGAAGACAAAGCAAGGAGGTATCACAAAGAAGAAATGAGGATTCTCAAGGAACAAGAAAGAGTAGATGAGTTAAAAAGATATGAAGAAGATATTAGAAGAGAGAGGGAAGAAGAAGAGCGGCAAAAAGCTAAGAAGAAAAAGAAAAAGAAAAAGCCTGATTTAAGAGATGAATATTTAGATGATCCTAGGGAAAGAAGATATGGTAAGAGGATGCTAGAAAGAGAACGAAGTGCAAAAAGGAGATCCATTGAGTCAGGAAAGATTAGTGGAGATTTTATGCCGCCAACTAAACGTCGAAGAGGGGGAGGAGGAGAGGTTGGTTTGGCAAATATCTTGGAGAGCATTGTGGACGCCATTGTGAAAGATAGGCACGATCTGTCTTTTCTATTTGTGAAACCAGTGTCCAAGAAAGAAGCTCCGGACTACCTGGATATCATAGAGAGACCTATGGATCTTTCCAGAATCCGGGAGAGGGTTCGAAATATGGAGTACAAAAGCCGCGAAGATTTCAGACATGATGTCTGGCAGATTACTTATAATGCCCATAAATATAACGATGGGCGAAATCCTGGGATTCCTCCCCTTGCAGATATGCTTTTGGAATATTGTGATTATTTGTTGAATGAGAATGATGATAGTCTCACTGCTGCTGAAGCTGGTATTGAAATGAAAGATTTTTAA 5640 0.4103 MGYDSDSPSQDGRDEDDEEEYEESDKGSCFLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLTDIDLSGKSPQTPRGVVEQDCGEKAEDAVDYEDIDEEYDGPETETANEEDYLLPKKDFFAAEASLEVLACKTSVFDDENYDEESENEEDFVNNDAKVNNISLAVEQEESFVDASKGESAFEDDLQVGSPQTEELDIDGQKPEVGGPDVLKRSMATPLPVLYVEDGKAVLRFSEIFGIQEPHRKGEKKEHRFKSLDLSDDIVEEDEEEFLKSFSQSLTLTKQVSVVHTDVSENNNVDLEFPKFGFLHADASLTAKDDRQPKDSCLSGEPMKEDFAEDFSWKDHPLMLANFYPLDQRDWENEILWGNSPVTSDNNVESCEISGPEMRASGGGDLEIESGIQNFQSVPQKILEEKDRNVFTCCSPVSLDPFDSRDSNGAKTNSISQSLFHPQLLRLEVDGSHLADGRGADISEMHNQSGQVKRLTKVMSQNRDLMDDSWIDKIMWGEHDQPKMKSKLIFDLQDNQMHFEVLDSKDGTHLRLHAGAMILTRSLKSISVDSSELSGQGGQYGWRYVANDKHYSNRKTSQQLKSNSKKRSAHGVKIFHSQPALKLQTMKLKLSNKDIANFHRPKAIWYPHDNEVAVKEQGKLPTHGSMKIIMKSLGGKGCKLHVDAEETLSSVKVKASKKLDFKASETVKIFYLGRELEDQNSLVAQNVQPNSLLHLVRTKIQLWPRAQRVPGENKSLRPPGAFKKKSDMSVKDGHVFLMEYCEERPLLLSNVGMGARLCTYYQKSSPDDQSGSLLRNTNSSVGHVISLDPADKSPFLGDLKPGCSQSSLETNMYRAPIFTHKVPSTDYLLVRSSKGKLSLRRIDKINVVGQQEPLMEVFSPGSKNLQTFLMNRILVHMCREFQAAEKRHLSPYIRIDDFLSQFPYLSEASFRKRIKEYANLQRGANGQSIFVKKRNFRMWSEDELRKMVTPELVCGYESMQAGLYRLKHLGITETHPNNISSAMSRLPDEAIALAAASHIERELQITPWNLSSNFVSCTSQGKENIERMEITGVGDPSGRGLGFSYARAPPKAPVSSAMVKKKAAAGRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTIGKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSALNGDDNESDSEGNSDLDSFAGDLENLLDAEEFEEGEEATNDLKRDKGDGVKGLKMRRRTTLAQATEEMEDEVAEAAELCRLLMDDDEADKKKKKKARVMVDARRLIPKLQSKFIFDNTEPVKQITNVLQLDGTNHFKEDATTDHREEENFSAKKSKSVKVNKAKKNEISPISLPNKKIKLNMGEGRKNQVFKEKKPSRETFVCGACGQLGHMRTNKNCPKYGEDLEAQLESTDMEKSIGKSSFVDPSSQSQHKLTSKKPISKITTKVAPVDNSTKIPLKFKCSSTEKSSDRPAIETLQSADKPVTSDSETAKSAKINKIIIPNKGKSDDTQAESLKHAIVIRPPTDSGRGQVDSHKFPIKIRPPAEIDREQSHKKIIIKRTKDVADLELDSPGGNTGLEHRKTKRIVELANFEKHRKQEMMYSSESLVKWNAKEDRRWWEEQEKRRNEVRLREDKARRYHKEEMRILKEQERVDELKRYEEDIRREREEEERQKAKKKKKKKKPDLRDEYLDDPRERRYGKRMLERERSAKRRSIESGKISGDFMPPTKRRRGGGGEVGLANILESIVDAIVKDRHDLSFLFVKPVSKKEAPDYLDIIERPMDLSRIRERVRNMEYKSREDFRHDVWQITYNAHKYNDGRNPGIPPLADMLLEYCDYLLNENDDSLTAAEAGIEMKDF 1879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00850 1879 MobiDBLite consensus disorder prediction 1440 1459 - -
Car08g00850 1879 MobiDBLite consensus disorder prediction 193 214 - -
Car08g00850 1879 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 14 1294 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Car08g00850 1879 MobiDBLite consensus disorder prediction 1 28 - -
Car08g00850 1879 Pfam Protein of unknown function (DUF3591) 580 1146 IPR022591 -
Car08g00850 1879 Gene3D - 1677 1878 IPR036427 GO:0005515
Car08g00850 1879 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 1387 1874 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Car08g00850 1879 SUPERFAMILY TAF(II)230 TBP-binding fragment 24 62 IPR036741 -
Car08g00850 1879 Coils Coil 1262 1282 - -
Car08g00850 1879 SUPERFAMILY Bromodomain 1746 1865 IPR036427 GO:0005515
Car08g00850 1879 Coils Coil 1667 1704 - -
Car08g00850 1879 Pfam Bromodomain 1775 1841 IPR001487 GO:0005515
Car08g00850 1879 MobiDBLite consensus disorder prediction 67 114 - -
Car08g00850 1879 MobiDBLite consensus disorder prediction 1686 1713 - -
Car08g00850 1879 MobiDBLite consensus disorder prediction 10 24 - -
Car08g00850 1879 Gene3D - 22 68 IPR036741 -
Car08g00850 1879 Pfam TATA box-binding protein binding 20 61 IPR009067 -
Car08g00850 1879 MobiDBLite consensus disorder prediction 1483 1513 - -
Car08g00850 1879 SMART ubq_7 660 732 IPR000626 GO:0005515
Car08g00850 1879 ProSitePatterns Bromodomain signature. 1780 1837 IPR018359 -
Car08g00850 1879 ProSiteProfiles Ubiquitin domain profile. 660 730 IPR000626 GO:0005515
Car08g00850 1879 CDD Ubl_TAFs_like 660 731 - -
Car08g00850 1879 Pfam Ubiquitin family 664 732 IPR000626 GO:0005515
Car08g00850 1879 CDD Bromodomain 1764 1860 - -
Car08g00850 1879 Gene3D - 642 732 - -
Car08g00850 1879 PRINTS Bromodomain signature 1778 1791 IPR001487 GO:0005515
Car08g00850 1879 PRINTS Bromodomain signature 1792 1808 IPR001487 GO:0005515
Car08g00850 1879 PRINTS Bromodomain signature 1808 1826 IPR001487 GO:0005515
Car08g00850 1879 PRINTS Bromodomain signature 1826 1845 IPR001487 GO:0005515
Car08g00850 1879 PANTHER BNAA01G26290D PROTEIN 14 1294 - -
Car08g00850 1879 PANTHER BNAA01G26290D PROTEIN 1387 1874 - -
Car08g00850 1879 SUPERFAMILY Ubiquitin-like 630 730 IPR029071 -
Car08g00850 1879 SMART bromo_6 1754 1865 IPR001487 GO:0005515
Car08g00850 1879 MobiDBLite consensus disorder prediction 93 114 - -
Car08g00850 1879 ProSiteProfiles Bromodomain profile. 1775 1845 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00850 Car-Chr8 7604950 7625993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00850 660 730 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 35.211 3.58e-06 47.4