Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00849 ATGTCCCTCCTCAGCAGATTCTTCTACAAAAGACCCCCAGATGGCTTACTTGAATTCATCGATAGAGTTTACGTTTTCGATTCATGCTTCTCCACAGAAGCATTACCAGACGGAATGTACCAGTTGTACTTGCACGAAATCGTAACGGAGTTACACGAAGAGTTTCCAGAATCTTCGTTTCTCGCCATCAATTTTCGCGACGGAGAGAAGCGTAGCAATTTCGCCGAATTAATGTGTGATTACGATGTAATCGTTATGGATTATCCAAAACAATATGAGGGTTGTCCTCTTTTGCCACTCTCTCTCGTTCAGCATTTTCTTCGCGTTTGTGAGAGTTGGCTTATGCTTAAGAATCATCATAACGTGATTTTGCTTCATTGTGAGAGAGGTGGTTGGCCTCTTTTGGCTTTTTTATTGGCAAGTTTGTTGATTTTCAAAAGGGTTCATAGTGGTGAAAAAAAGACACTTGAAATGGTTCATAGAGAAGCACCTAAGGGTTTGTTAAAGTTATTATCACCTTTGAATCCTTTGCCTTCACAACTTCGTTATATTCAATATGTTGCTAGGAGGAATATTGCTCCTGAGTGGCCCCCACCTGAGAGGGCTTTGTCTTTGGATTGTGTTATTATTAGGGGAATTCCTTGTTTTGATTCATCTAATGGGTGTAGGCCAATGTTTAGGATTTTTGGTAGGAATTTGCTTAGTAAAGGTGGAGTTTCTACTCAGATGATTTATAATATGCACAAGAAGAAGAAGCACTTGAGGCATTATCGTCAGGTAGACTGTGATGTGATTAAGATTGATATTCAATGTTTAGTGCAAGGAGATGTGGTTTTGGAATGTGTTCATTTGGATTTGGATCCAGAGAGGGAAGTAATGATGTTTCGTGTGATGTTTAGCACGGCTTTTATTCGATCCAACATACTGATGTTGAACACTGAAAACTTGGACATCCTTTGGGATTCAAAGGAGCGGTACCCGAAAGGCTTTCGTGCTGAGGTTTTATTTGGGGAGGTTGAAAACATAAGTCCTCAGAGAGCTCCGACGGAAACAACCATTTTGAACGGTGAGGAGAAAGGTGGATTGCCGATAGAAGCGTTTTCAAGAGTTCAAGAACTTTTTAGTGGAGTGGAATGGATTGACAACGGTGATGCTGCAGCAGTCTGGCTGCTTAGACAGCTTACTGTCTTAAATGACGCGAAAGAGTTTTCGAGGTTGCAAGGTAAAGGAAGTTGGTATTCATCGCCTGCTGACTCCGAAGAAGAAAATAATGAATCAAGTATTGCTGATAGTTCAGACGAGGTCTCTGATGTTACTCCCAAGTCTTTTGCTGATCCTTCAAAATTATGGACGTCGGACACCCCTGATTTGGATCATTTAGCTTTTGAAAACAATGCTGAAAATTGTGTAAATCTCGTTTCTAGAATGCCTGATCAGTTATTGATTGATAATAATGCTGGTGGTCCACCTCCACCCCCTCCCCCCTCCATGGCCAGCAATGCTAGCAGTGCTTCCGCATTGCCTTCGCCTCCTCTTCTAGCACCTGTACATACAAGTTCAGTCCCATTACCTCCACCCCCACCACCTCCTCCAGGATTTGCTCGGACAGGTTCAGCCCCACCACCTCCACCTCCACCTCCTGGTCTAGTACAGACAGGTTCGGCTCCCCCTCCCCCACCTCCCCCTCCTCCAGGTCTTGTCCGAAAAGGTTCAATCCCTCCACCTCCACCTCCACCCTTTTCTGGTCCTACACGGTCAGCACCACCACCTCCTCCTCCTCCACCACCAGGTCCTACACAAATAGGTTTAACCCCCCCGCCGCCGCCACCTCCTCCTCCACTTCCAATACGAACAGGTTCAGCCCCACCTCCTCCAGGTTCGGTACTGAAAAGTTCATCCCCTCCACCTCCACCTCCACCGCCTCCAGGCTCTACACGAGTAGGATCATCCCCGCCACCCCCACCGCCTCCAGGCTCTACACGAATAGGATCAGCCCCACCACCACCACCTCCACCCCCACCGCCTCCAGGATCTACACGAATAGGATCAGCCCCTCCACCTCCACCCCCACTGCCTCCAGGATCAGCTCCACCACCTCCACCCCCACTGCCTCCAGGATCTACACGAATAGGATCAGCTCCACCACCTCCACCGCCTCCAGGCTCTACTCGAATAGGATCAGGCCCACCACCTCCACCCCCACCACCTCCAGGCACTACACGAGCAGGATCAGCCCCACCACCTCCACCACCACCTCCAGGTTCTACAAGGACAGGATCAGCACCACCACCTCCACCACCTCCTCCAGGTCTTACACGGCCAGGTTCAGCCCCACCACCTCCACCACCACCAGGTCCTGTTCGAGCAGGTTCAGCCCCGCCACCTCCACCTCCTCCAGGATCTGCTCGAACAGGTTCAGCTCCGCCACCGCCAAAGCCTCCTAACGCTCCTCCTCCACCACTTGGTCGTGGTTCATCGCCGGCACCTCCACTTACTGCAGGCAGGGCGCCTAGTGTGCCTCCACCACCAGGCAAGGCTTCTTTAGCAACAACAAATGTGGGAAGAGGTCGTGGCATTGGTGCGACTGCTACTGTTGCTAAGAAAACATTGTTAAAGCCCCTACATTGGGTGAAAGTGTCTCGAGCAGCCCAAGGGAGTCTATGGGCAGATTCACAGAAACAAAACAGTGAATCAAGGGCTCCTGAAATAGACATATCAGAACTTGAGATCCTGTTTTCAGCCGCAACTATTTCTGATGGGAATAGTACTAAAGGTGGAGTTCGGCGGGGTTCTAATCTTAACAAACCTGAGAAAGTACAATTGATTGACCTGCGTAGAGCATATAATTGTGAAATAATGCTCTCTAAGATCAAAATTCCTTTGCCAGATATGCTTAATGCAGTTCTGGCATTGGATTCGGGTATCCTGGATATTGATCAGGTTGAGAATCTCATCAAGTTCTGTCCCACAAAGGAAGAGATGGAGGTTCTGAAGAACTATACTGGGAAGAAGGATATGCTTGGAAAGTGTGAGCAGTTTTTTATGGAGCTGATGAAGGTTCCACGAGTTGAATCCAAATTAAGGGTGTTTGCTTTCAAAATCACCTTTTCTGGTCAGGTGAGCGATTTAAGGATGAATTTGAATACAATCAACGATGCAACCAGAGAGGTCAAAGAATCTGTAAAATTGCGTCAAATAATGCAGACTATTCTTACGTTGGGCAATGCTTTGAATCAGGGAACAGCACGAGGATCGGCAGTAGGATTCAAATTGGACAGCCTTCTCAAATTATCCGATACCCGCGCAAGAAATAACAAAATGACTTTAATGCATTATTTGTGCAAGCTTCTTGCTGAGAAAATGCCAGAATTGATAGATTTTGACAAGGATCTTGTTCATTTGGAAGCTGCTTCTAAGATCCAACTAAAAGCATTAGCTGAAGAAATGCAAGCTGTGCATAAAGGTTTAGAGAAAGTTGAGCAAGAACTCACTGCTTCTGAAAATGATGGTACTATATCTTTAGGATTTCGCAAGGTGTTGAAGAATTTTCTTGATTTTGCCGAAGCTGATGTAAGGTCACTTATATCATTGTATGCCGATGTGGGAAGAAATGCTGATTCTTTGTCTCAGTACTTTGGAGAGGATCCAGCTAGGTGCCCCTTTGAACAAGTAACACAAATACTTGTTGTCTTCGTTAAAACCTTCAACAAATCAAGGGAGGAGAACCAAAGGATAGCAGATGCCGAGAAAAAGAAATTAGAGAAAGAAGCCATGAAGGACAAGGCAGCTAATAACGCGCATTCTAGAAAAGAGGTTGCTCGATAG 3825 0.4661 MSLLSRFFYKRPPDGLLEFIDRVYVFDSCFSTEALPDGMYQLYLHEIVTELHEEFPESSFLAINFRDGEKRSNFAELMCDYDVIVMDYPKQYEGCPLLPLSLVQHFLRVCESWLMLKNHHNVILLHCERGGWPLLAFLLASLLIFKRVHSGEKKTLEMVHREAPKGLLKLLSPLNPLPSQLRYIQYVARRNIAPEWPPPERALSLDCVIIRGIPCFDSSNGCRPMFRIFGRNLLSKGGVSTQMIYNMHKKKKHLRHYRQVDCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVMFSTAFIRSNILMLNTENLDILWDSKERYPKGFRAEVLFGEVENISPQRAPTETTILNGEEKGGLPIEAFSRVQELFSGVEWIDNGDAAAVWLLRQLTVLNDAKEFSRLQGKGSWYSSPADSEEENNESSIADSSDEVSDVTPKSFADPSKLWTSDTPDLDHLAFENNAENCVNLVSRMPDQLLIDNNAGGPPPPPPPSMASNASSASALPSPPLLAPVHTSSVPLPPPPPPPPGFARTGSAPPPPPPPPGLVQTGSAPPPPPPPPPGLVRKGSIPPPPPPPFSGPTRSAPPPPPPPPPGPTQIGLTPPPPPPPPPLPIRTGSAPPPPGSVLKSSSPPPPPPPPPGSTRVGSSPPPPPPPGSTRIGSAPPPPPPPPPPPGSTRIGSAPPPPPPLPPGSAPPPPPPLPPGSTRIGSAPPPPPPPGSTRIGSGPPPPPPPPPGTTRAGSAPPPPPPPPGSTRTGSAPPPPPPPPGLTRPGSAPPPPPPPGPVRAGSAPPPPPPPGSARTGSAPPPPKPPNAPPPPLGRGSSPAPPLTAGRAPSVPPPPGKASLATTNVGRGRGIGATATVAKKTLLKPLHWVKVSRAAQGSLWADSQKQNSESRAPEIDISELEILFSAATISDGNSTKGGVRRGSNLNKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMLNAVLALDSGILDIDQVENLIKFCPTKEEMEVLKNYTGKKDMLGKCEQFFMELMKVPRVESKLRVFAFKITFSGQVSDLRMNLNTINDATREVKESVKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELIDFDKDLVHLEAASKIQLKALAEEMQAVHKGLEKVEQELTASENDGTISLGFRKVLKNFLDFAEADVRSLISLYADVGRNADSLSQYFGEDPARCPFEQVTQILVVFVKTFNKSREENQRIADAEKKKLEKEAMKDKAANNAHSRKEVAR 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00849 1274 SMART PTEN_C2_2 198 914 IPR014020 -
Car08g00849 1274 Gene3D - 197 342 - -
Car08g00849 1274 SMART it6_source 487 1274 IPR015425 -
Car08g00849 1274 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Car08g00849 1274 Coils Coil 1142 1162 - -
Car08g00849 1274 MobiDBLite consensus disorder prediction 480 855 - -
Car08g00849 1274 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Car08g00849 1274 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 187 IPR029021 -
Car08g00849 1274 Coils Coil 1236 1265 - -
Car08g00849 1274 Pfam Formin Homology 2 Domain 865 1235 IPR015425 -
Car08g00849 1274 Gene3D Formin, FH2 domain 859 1246 IPR042201 -
Car08g00849 1274 ProSiteProfiles Formin homology-2 (FH2) domain profile. 861 1261 IPR015425 -
Car08g00849 1274 MobiDBLite consensus disorder prediction 408 451 - -
Car08g00849 1274 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Car08g00849 1274 MobiDBLite consensus disorder prediction 515 826 - -
Car08g00849 1274 MobiDBLite consensus disorder prediction 408 422 - -
Car08g00849 1274 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Car08g00849 1274 MobiDBLite consensus disorder prediction 1243 1274 - -
Car08g00849 1274 PANTHER FORMIN-J 764 1268 - -
Car08g00849 1274 PANTHER FORMIN-J 1 579 - -
Car08g00849 1274 SUPERFAMILY Formin homology 2 domain (FH2 domain) 936 1264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00849 Car-Chr8 7592233 7601886 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00849 1 434 FH2 protein (formin) Gene Family AT1G31810 76.959 0.0 746