Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00841 ATGTACGGAGTTGGAGGAGACGATGCCCTGCCTGCTCGCCTCGGCATAGTAACGCCATCCATGCTGATTCCGGTAACGCCGTCGATGATTTCCCGCGACATGTCTCCGACGCCGGCGAGGGAGGAGAGGCTTCCAGCTCAACCGCAGTGGAGTCAGCAGGAGACGAGAGAGTTTATAGCTATACGCGCGGAGCTGGAGAGGGATTTCACTGCGTCGAAGAGAAACAAGACGCTTTGGGAAGTGGTGAGTTCCAAGATGAGAGAGAGAGGGTATAGGAGGAGCCCTGAACAATGTAAATGCAAGTGGAAGAACCTTGTTAATCGCTATAAGGGAAAAGAGACATCTGATCCAGAGCATGGCAAGCAATGCCCATTTTTTGAAGAATTGCATGCTGTTTTCACCCAAAGAGCCCATAACATGCAACGGTTACTTCTTGAATCCGAAACTCGTTCAGCTCAAACAAAAAAAGGAGTGAAAAGATTAAGTGTAGATCGATCCTCAGAGGAATTTTCAGAAGAGGATGAAGTTGAAGACGACAGTGAAGACGAGAGACCTGCGAGAAGCAATAACCGTAAAAGGAAAGCTGGCAAAATTGCAATGGAGAAGCCTTCAAGGGCAAAAAGTACATGCAGTAGTACTAGTGATATTCAGGATATGCTCAAGGAATTTTTCCAGCACCAGCTAAGGATGGAGATACAGTGGAAGGAGATAATGGAGAGGCGTGCACATGAAAGACAGTTGTTTGAACAGGAATGGCGGCAGTCGATGGAAAAGCTTGAGAGGGAGAGATTAATGATTGAACAGGCGTGgagggagagagaagagcagaggagactgagggaagagagtagggcagagagaAGGGATGCTTTGTTGACGACCCTTTTAAACAAACTCATTCATGAAAGTAACTAA 915 0.4415 MYGVGGDDALPARLGIVTPSMLIPVTPSMISRDMSPTPAREERLPAQPQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSSKMRERGYRRSPEQCKCKWKNLVNRYKGKETSDPEHGKQCPFFEELHAVFTQRAHNMQRLLLESETRSAQTKKGVKRLSVDRSSEEFSEEDEVEDDSEDERPARSNNRKRKAGKIAMEKPSRAKSTCSSTSDIQDMLKEFFQHQLRMEIQWKEIMERRAHERQLFEQEWRQSMEKLERERLMIEQAWREREEQRRLREESRAERRDALLTTLLNKLIHESN 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00841 304 ProSiteProfiles Myb-like domain profile. 50 106 IPR001005 -
Car08g00841 304 CDD GT1 48 113 - -
Car08g00841 304 MobiDBLite consensus disorder prediction 182 201 - -
Car08g00841 304 Pfam Myb/SANT-like DNA-binding domain 48 131 IPR044822 -
Car08g00841 304 MobiDBLite consensus disorder prediction 152 167 - -
Car08g00841 304 PANTHER - 40 302 - -
Car08g00841 304 Coils Coil 249 269 - -
Car08g00841 304 Gene3D - 50 111 - -
Car08g00841 304 SMART sant 46 108 IPR001005 -
Car08g00841 304 PANTHER - 40 302 - -
Car08g00841 304 MobiDBLite consensus disorder prediction 146 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00841 Car-Chr8 7516881 7519489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00841 48 304 Trihelix Transcription Factor Family AT2G38250 44.275 7.89e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Car08g00841 Myb_DNA-bind_4 1.1e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00841 - - gmx:100812635 446.817