Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00838 ATGGGCATTTGTCTGATTAAAGGGCAGTGGCCGTGGCTTCTATATGTCTTGCTGATAGATATTGTAATTAATAACACGGAAGCAATCAGTCCTGATGGTGAGGCACTTGTCAACTTCAGGACAGCCATTATTAGCTCTGATGGTATCCTGTTACAATGGAGGCCCGAGGATCCTGACCCATGTAAATGGAAAGGAGTTAAATGTGATCAAAAAACTAAGAGAGTGACACATTTGAGTCTATCTCACCATAAGTTAAGTGGTTCTTTATCACCTGACCTTGGGAAGTTAGAGCGGCTGAAAGTTCTTGCTCTTCATAACAACAACCTCTATGGGGTAATTCCACCAGAACTGGGAAATTGCACTGAATTGCAGGGAATCTTTTTACAGGGTAATTACCTCAGTGGAATGATTCCAAGTGAAATAGGAAACCTCTCACAGCTTCAAAATTTGGATATATCAAGCAATTCCCTTGGTGGGAATATTCCAGCATCAATTGGAAAGTTGTATAATCTAAAAAACTTCAACGTATCAACCAATTTTCTGGTCGGACCAATACCTTCTGATGGTGTCCTTGCAACCTTTACTGGAAGCTCGTATGTTGGAAATCGTGGTTTGTGTGGGGTACAAATCAGTTCAACTTGTAAAGATGATGGTTCACCTGGGAGAAATGGTCAATCTAATTCAGACCAAAGTCAAAATGGAAAGAAGAAATATTCTGGCCGACTTCTCATCAGTGCATCAGCAACTGTGGGTGCACTCCTTTTGGTGGCACTTATGTGCTTCTGGGGTTGTTTTCTTTATAAAAAGTTTGGTAAAAATGATAGAATAAGTCTTGCAATGGATGTTGGTGCAGGTGCCTCAATAGTGATGTTTCATGGAGACCTTCCATATTCTTCAAAAGACATTATTAAGAAACTAGAGACTTTGAATGAGGAACACATAATAGGAGTAGGGGGATTTGGAACTGTTTACAAGCTTGCAATGGATGATGGGAATGTATTTGCTTTGAAAAGGATTGTAAAGATGAATGAGGGCTTTGATCGTTTTTTTGAGAGGGAGCTTGCAATTCTTGGTAGCATCAAACACCGTTATTTAGTTAACTTACGGGGATATTGCAATTCGCCTACATCAAAGTTGTTAATATATGACTACCTACCTGGTGGCAGTCTTGATGAAGTTCTTCATGAAAGATCTGAGCAACTAGACTGGGATGCACGGTTGAATataatcatgggagctgcaaaagggcttgcctacttgcaccacgattgttctcctaggatcatacaccgagacataaaatcaagcaacattttgctcgatgGAAAATTGGATGCTCGGGTTTCTGATTTTGGACTTGCCAAACTTCTAGAGGATGAAGAATCTCACATCACTACTATTGTTGCTGGAACATTTGGTTATCTAGCTCCAGAGTATATGCAAAGTGGCAGAGCAACCGAGAAGACCGATGTTTATAGTTTTGGGGTGTTGACACTTGAAGTGCTTAGTGGAAAGCGGCCAACAGATGCATCCTTCATTGAAAAGGGTCTCAATATTGTTGGTTGGTTGAATTTCCTTATTACCGAAAATAGGCCGAGAGATATTGTCGATCCTCTATGTGACGGGGTTCAGGTTGAGAGCCTTGATGCCTTACTCTCTGTGGCTATTCAGTGTGTTTCCTCAAGTCCAGAGGATCGACCCACTATGCACCGAGTGGTCCAGTTGCTTGAATCGGAGGTTCTAACTCCATGCCCAAGTGACTTCTATGACTCCAACTCCGACTAG 1785 0.391 MGICLIKGQWPWLLYVLLIDIVINNTEAISPDGEALVNFRTAIISSDGILLQWRPEDPDPCKWKGVKCDQKTKRVTHLSLSHHKLSGSLSPDLGKLERLKVLALHNNNLYGVIPPELGNCTELQGIFLQGNYLSGMIPSEIGNLSQLQNLDISSNSLGGNIPASIGKLYNLKNFNVSTNFLVGPIPSDGVLATFTGSSYVGNRGLCGVQISSTCKDDGSPGRNGQSNSDQSQNGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDRISLAMDVGAGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGVGGFGTVYKLAMDDGNVFALKRIVKMNEGFDRFFERELAILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEVLHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGKLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLTLEVLSGKRPTDASFIEKGLNIVGWLNFLITENRPRDIVDPLCDGVQVESLDALLSVAIQCVSSSPEDRPTMHRVVQLLESEVLTPCPSDFYDSNSD 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00838 594 SUPERFAMILY Protein kinase-like (PK-like) 294 576 IPR011009 -
Car08g00838 594 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 1 3 594 IPR031071 GO:0004672|GO:0005524|GO:0030244
Car08g00838 594 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Car08g00838 594 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Car08g00838 594 Gene3D Ribonuclease Inhibitor 30 215 IPR032675 -
Car08g00838 594 MobiDBLite consensus disorder prediction 214 234 - -
Car08g00838 594 Gene3D Phosphorylase Kinase; domain 1 282 384 - -
Car08g00838 594 ProSiteProfiles Protein kinase domain profile. 309 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00838 594 Gene3D Transferase(Phosphotransferase) domain 1 385 582 - -
Car08g00838 594 PANTHER RECEPTOR-LIKE PROTEIN 55 3 594 - -
Car08g00838 594 SMART serkin_6 309 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00838 594 Pfam Protein kinase domain 311 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00838 594 SUPERFAMILY L domain-like 31 189 - -
Car08g00838 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Car08g00838 594 ProSitePatterns Protein kinases ATP-binding region signature. 315 341 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00838 Car-Chr8 7497223 7506537 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00838 1 585 Receptor kinase-like Gene Family AT2G35620 74.701 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Car08g00838 Pkinase 7.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00838 - - gmx:100819230 1093.18