Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00834 ATGAAAGAACCATCATCAAAACCATGGAGACCATTCACATCAAATTGTTGCACAACTGAAAACCAAACAATTCTTAGAAACTTCAGTAGGTGCAAACCATCACGTTCAGATTATTCTAAGAACATTGCACCTTTACCATCTTTTAGAAGACTATCTTTTTCCGATCTTAGCCGTTCGTCTTCGACACGAATTAATGAAGATCTTGCACTTTCTTTTGGTTCTGATTTGTTTGATTTTCAGCTGAGTGAACTTCGCGCCGTTACGCAGAATTTTTCGAGTAATTTCTTGCTTGGTGAAGGTGGTTTTGGAACTGTTCATAAAGGTTATTTTGATGATAATTTTAGACAAGGTTTGAAGGCACAACCTGTTGCTGTTAAGCTTTTGGATATTGAAGGTTTACAAGGACATCGTGAATGGCTTgcagaagtgatttttcttggtcagctaagacatcccaatttggtgaagttgattggatattgttgtgaggatgaagaaagactacttgtctatgaattcatgccaaGGGGAAGCTTAGAGAATCACTTGTTCAGAAGATTAACATCACTACCATGGGCAACAAGGTTAAAAATTGCAATAGGTGCTGCTAAAGGCCTTTCTTTCTTGCATGGAGCTGAGAAACCTGTCATTTATAGAGATTTCAAGACTTCCAATGTCTTACTTGATTCAGACTTTACAGCAAAATTATCAGATTTTGGACTTGCAAAAATGGGGCCAGAGGGATCAAAGTCACATGTTACGACAAGAGTTATGGGTACTTATGGATATGCAGCCCCAGAATACATCTCAACAGGGCACTTGACTACAAAAAGTGATGTCTACAGCTTTGGAGTAGTCCTGCTAGAACTGCTAACAGGAAGGAGAGCAACAGACAAAACAAAGCCAAAGACTGAGCAAAACCTTGTGGATTGGTCAAAGCCTTATTTGAGTAGCAGTAGGAGATTGAGGTACATTATGGATCCAAGGCTTTCAGGCCAATATTCTGTGAAGGGTTCAAAAGAGATTGCACATTTGGCATTACAATGCATAAGTTTGCATCCTAAAGATAGACCAAGAATGGCAATGATTGTTGAAACACTTGAAAGTTTGGAACAGTTCAAGGATATGGCAGTTACTAGTGGACATTGGCCTATATCATCAAAATCTACTAGAAATGGAGGCTCTATTAATAATAAGTTGAAAACTAGAGTaagtgcaaatcagaagaagcagatggttccagttaagagcataaaaacttga 1263 0.3373 MKEPSSKPWRPFTSNCCTTENQTILRNFSRCKPSRSDYSKNIAPLPSFRRLSFSDLSRSSSTRINEDLALSFGSDLFDFQLSELRAVTQNFSSNFLLGEGGFGTVHKGYFDDNFRQGLKAQPVAVKLLDIEGLQGHREWLAEVIFLGQLRHPNLVKLIGYCCEDEERLLVYEFMPRGSLENHLFRRLTSLPWATRLKIAIGAAKGLSFLHGAEKPVIYRDFKTSNVLLDSDFTAKLSDFGLAKMGPEGSKSHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRATDKTKPKTEQNLVDWSKPYLSSSRRLRYIMDPRLSGQYSVKGSKEIAHLALQCISLHPKDRPRMAMIVETLESLEQFKDMAVTSGHWPISSKSTRNGGSINNKLKTRVSANQKKQMVPVKSIKT 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00834 420 CDD STKc_IRAK 97 370 - -
Car08g00834 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Car08g00834 420 PANTHER OS01G0588500 PROTEIN-RELATED 32 409 - -
Car08g00834 420 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL15-RELATED 32 409 - -
Car08g00834 420 ProSiteProfiles Protein kinase domain profile. 91 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00834 420 Pfam Protein tyrosine and serine/threonine kinase 97 367 IPR001245 GO:0004672|GO:0006468
Car08g00834 420 Gene3D Transferase(Phosphotransferase) domain 1 174 383 - -
Car08g00834 420 SUPERFAMILY Protein kinase-like (PK-like) 71 368 IPR011009 -
Car08g00834 420 Gene3D Phosphorylase Kinase; domain 1 53 173 - -
Car08g00834 420 ProSitePatterns Protein kinases ATP-binding region signature. 97 126 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00834 Car-Chr8 7477334 7480828 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00834 79 406 Glycoside Hydrolase AT3G07070 48.955 1.52e-102 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car08g00834 PK_Tyr_Ser-Thr 5.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00834 - - gmx:100814241 728.013