Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00828 ATGGTTTCTGTGCAAATACGAGTGTCGGTTCTTGGGTTCTCTGCACAAACTGAAAAGCCTTTTTACATTCTGTTTCTCCATTTTACAAGCCATCACATTCACCTCAACAAACTTCATTTAAAACTACCATTACCTGATTTCATACCTTATTCTTCAATTCAGAATGGAGAGCACAAGATTAAGCCAATGGTTAAAGTTAAACCTTCTGGTGTTTTAATAAAAGGAGCCGTTTGTTTGGATGGAAGTCCACCAGCTTACCATTTTGATAAAGGATTTGGAACTGGAATTAACAGTTGGTTAGTTCAATTTGAGGGAGGAGGATGGTGCAACAATATCACAACTTGCCTTGGTCGCAAGATGAATCGTTTAGGTTCATCAAAGCAAATGGCTAAGCAAATTGCCTTTTCAGGAATTTTAAATAACAGGAGACTGTTTAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTAGATATTGTGATGGTTCATCTTTTACTGGTGATGTGGAAATAGTCAATCCAGTAACTAAGTTGCACTTCAGAGGAGCAAGAGTTTTTAATGCTGTCATGGAAGAGTTGCTAGCAAAAGGAATGAAAAATGCTAAAAATGCTATTATCTCAGGATGTTCAGCTGGAGGATTGACTTCAATACTGCATTGCGATCGATTTCGAGCTCTTTTACCGCAAGGTGCTAAAGTAAAATGCCTCTCAGATGCCGGTTACTTTATCAATGCAAGGGATGTATCTGGAACACAGCATATTGAACAGTTCTTCAGTCAAGTTGTTACTACACATGGGTCTGCAAATAATTTGCCTAGATCATGCACTTCAAGACTCAATCCAAAGCTGTGCTTTTTCCCTCAATATGTTGTATCACAAATCACTACACCAATCTTCTTTGTCAATGCGGCATACGACTCGTGGCAGATTAAAAACATTTTGGCGCCGGGTGTTGCCGATCCTCATGGACACTGGCATAGCTGCAAAATGGATATAAACAACTGCTCTTCTAATCAGCTAGATCTAATGCAAGGCTTCAGAACAGAATTCCTAAGAGCATTGACTGTTCTAGGAAACTCTCCATCCAAAGGAATGTTCATAGACTCTTGCTATGCTCATTGCCAAACTGAAATGCAAGAAACATGGTTTAGAAGCGACTCTCCATTGTTGGCCAAGACAACCATAGCAAAGGCTGTAGCAGACTGGTTTTATGAAAGAAGGCTTTTCCATCAGATAGATTGTCCTTACCCTTGCAATCCAAGTTGTCACAACCGCGTTTTCGAACCACAAGACAACCCAGAAAAAAATGTCAGCACCAAAGGAACTTCAGGTGCATCAGCTATAAAGCTCAGTTTTCCAAAATTATCAAACAAGGCACAATGGATTGAGCTTTTGTGCATTAGAACCGGCGGGATTCTACTAACGTTGGTTATTCTGGTCATCCTATAA 1449 0.3968 MVSVQIRVSVLGFSAQTEKPFYILFLHFTSHHIHLNKLHLKLPLPDFIPYSSIQNGEHKIKPMVKVKPSGVLIKGAVCLDGSPPAYHFDKGFGTGINSWLVQFEGGGWCNNITTCLGRKMNRLGSSKQMAKQIAFSGILNNRRLFNPDFYNWNRIKVRYCDGSSFTGDVEIVNPVTKLHFRGARVFNAVMEELLAKGMKNAKNAIISGCSAGGLTSILHCDRFRALLPQGAKVKCLSDAGYFINARDVSGTQHIEQFFSQVVTTHGSANNLPRSCTSRLNPKLCFFPQYVVSQITTPIFFVNAAYDSWQIKNILAPGVADPHGHWHSCKMDINNCSSNQLDLMQGFRTEFLRALTVLGNSPSKGMFIDSCYAHCQTEMQETWFRSDSPLLAKTTIAKAVADWFYERRLFHQIDCPYPCNPSCHNRVFEPQDNPEKNVSTKGTSGASAIKLSFPKLSNKAQWIELLCIRTGGILLTLVILVIL 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00828 482 PANTHER NOTUM-RELATED 71 443 IPR004963 GO:0016787
Car08g00828 482 Pfam Pectinacetylesterase 74 407 IPR004963 GO:0016787
Car08g00828 482 PANTHER PECTIN ACETYLESTERASE 71 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00828 Car-Chr8 7425548 7431425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00828 74 433 Carbohydrate Esterase AT4G19420 64.557 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00828 K19882 - gmx:100776478 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00828 08 7425548 7431425 Car07g01741 07 17977970 17982308 PCT
Car07g01742 07 17988282 17993913 Car08g00828 08 7425548 7431425 PCT