Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00821 ATGAAGTCTTTTTTGCACATGTTACATGCATTTTTCCTTATATGCCTTTACATATTACAACTCTATACGTTAAACCTACTTTGGTTTGGACCAAATAAAACTGCTTATGCATTAGGAAATGATACTGATTTTTtggcattgctcaaattcaaaaaatcaatatctaatgacccatttggaatcttagactcttggaatggttcaactcacttttgcaagtggcatggaatcacatgcatgcatcaaagagttacagagttgtacttagcaggaaatcagttgcatggatccatatcacctcatgttggtaatctcacttttttgacaaacttcaatctcatgaacaatagcttctatggaacaattccacaagaattgtgtagtttagtaaaactacagcaactttatctcaataataactcattggttggagaaattccttcaaatttgacaagtttgttgaatctcaaaagcttatacttgtcaaggaacaatttggttggcacaataccaattgaaattggttctcttaagaagctccaaagaatattcatttggaacaacaatttaacaggagaaattccaccaactataggaaatctttcatttcttataaattttaatgttggttccaacaatttggaggggaatattccacaagaaatatgccatttgaagaacttggaaactatatcagttggtataaacaaattgtctggtaaacttccactttgtctttataatatgtcatctcttactcttattgctgttgacttgaaccaatttaatggctctcttccaccaaaaatgttccatacccttcccaatctcaaaacacttttcattggtgggaatcaaATCTCAGGTCTAATCCCAACTTCCATCACAAATGCATCTTACTTAAGAGCTTTTGATATCACTCAAAATCAATTCATAGGTCATGTTCCAAGTCTTGGGAAGCTAAAAGATCTTCAGCTCATAGGTTTGTCTCAGAACAATCTTGGAAGCAACTCAACTAATGATTTGGAGTTTGTAAAGTCATTGGAAAATTGTAGTAAGTTGTATGTGATTGATATATCCTACAATAATTTTGGAGGTCTTTTACCAAATACTTTAGGAAATATGTCCAAACAACTCAACAGCATATATCTTGGGGGAAATCATATATCAGGAAAAATTCCTGCAGAATTAGGAAATCTAGTCAACCTATATCTCTTCACTGTGGAAAATAACCGTTTTGAAGGGATGATTCCAACTACTTTTGTGAAGGTTCAAAAGTTGCAAGTGTTGGAATTGAGGGGAAACAAGTTGTCAGGAAGTATACCAGCCTTTATAGGCAACCTCAGTCAGTTGTTTTATTTGGGTTTAGGACATAATAAGTTAGAAGGAAATATTCCTCCAAGCATAGGAAACTGTCAAAAGTTATATTACTTAGATCTTTCTCAAAACAATCTTAGAGGAACCATACCAATAGAGGTATTTAATCTTTTCTCATTAACAAAATTAttggacttgtcgcgaaacgcattgagtggtagtctaccgcaagaagtgggcaggctagaaaatattggaatgttgaatttttctgagaatcatctgtctggtgatattcctaaaaccattggaaaatgtgaaagcttagagtaccttcatctgcaaggaaactcctttcatggagtcataccaacctctttggtttcactgaaaagccttcaacatttagacttgtcacgaaaccgcttgtctggatcaattcctaaaggtcttcaaaatatttctttcttagaatacttcaatgtatcttttaacatgttggaaggagaggtaccaactgaaggtgtctttcaaaatgcaagtgaggtggtggtaacaggaaacaataacctttgtggaggtatttcaaagttgcacctacctccatgccctttgaaaggtaagaaacaagcaaaacatcattatctcaagttgatagcagtggtagttagtgtggcttcttttcttcttatacttctgtttattctaactatctactgtataaagaaaagaaacatgaaaccttcatctgattcaccaagaattgaccttttggttaagatttcatatgaagacctgcacaatggaaccgatggattctctacaaggaatttgataggatctggaagttttggctctgtctacttaggaactctcgagttagacgataaagttgtagcagtaaaggttttaaaacttcaaaagaagggagctcacaaaagtttcatggttgaatgtaatgcacttaaaaatattagacaccgaaatttggttaagattttaacaagttgttctagtacagatttcaaaggtcaagaatttaaagctcttgtttttgagtacatgagaaatggaagcttagaaagttggttgcatccagaaaaagaaattgcaggtccacaaaaaacattgaaccttgcacaaaggctaaatattattattgatgttgcttcagcatttcattatcttcaccatgaatgtgatcaacctgttattcattgtgatttaaagcctagcaatgttcttcttgatgattctatggtagctcatgtgagtgattttggcatagcaaaattgctcccaagtattggagtctccttgacacaaaatagcactgttggaataaaagggactattggttatgctcctccagagtatggaatgggttctgaagtgtcaaaatttggtgacatgtatagctttggagttcttatgatggaagtgcttactggtagaagacccactgatgaagtttttgaagatggtcagaatctgcatgactatgtTGCAATTTCATTTCCAGATAATCTTATAAAGATTTTGGACCCACATCTTGTATCAAGAGATGCAGAAGTAGCAAGAGAAGGTGGAAATAGTGAAAATCTCACTCCAAGTGTTGAGGAGTGTTTAGTTTCACTTTTTAGGATTGGACTTATTTGTTCAATGGAATCACCAAAAGAAAGAATGAATATCGTGGATGTCACTAGAGAACTTAGCATAGTCAGAAAGGCATTTCTCTCTGCGAATTTCCTACGAACATAA 3078 0.1147 MKSFLHMLHAFFLICLYILQLYTLNLLWFGPNKTAYALGNDTDFLALLKFKKSISNDPFGILDSWNGSTHFCKWHGITCMHQRVTELYLAGNQLHGSISPHVGNLTFLTNFNLMNNSFYGTIPQELCSLVKLQQLYLNNNSLVGEIPSNLTSLLNLKSLYLSRNNLVGTIPIEIGSLKKLQRIFIWNNNLTGEIPPTIGNLSFLINFNVGSNNLEGNIPQEICHLKNLETISVGINKLSGKLPLCLYNMSSLTLIAVDLNQFNGSLPPKMFHTLPNLKTLFIGGNQISGLIPTSITNASYLRAFDITQNQFIGHVPSLGKLKDLQLIGLSQNNLGSNSTNDLEFVKSLENCSKLYVIDISYNNFGGLLPNTLGNMSKQLNSIYLGGNHISGKIPAELGNLVNLYLFTVENNRFEGMIPTTFVKVQKLQVLELRGNKLSGSIPAFIGNLSQLFYLGLGHNKLEGNIPPSIGNCQKLYYLDLSQNNLRGTIPIEVFNLFSLTKLLDLSRNALSGSLPQEVGRLENIGMLNFSENHLSGDIPKTIGKCESLEYLHLQGNSFHGVIPTSLVSLKSLQHLDLSRNRLSGSIPKGLQNISFLEYFNVSFNMLEGEVPTEGVFQNASEVVVTGNNNLCGGISKLHLPPCPLKGKKQAKHHYLKLIAVVVSVASFLLILLFILTIYCIKKRNMKPSSDSPRIDLLVKISYEDLHNGTDGFSTRNLIGSGSFGSVYLGTLELDDKVVAVKVLKLQKKGAHKSFMVECNALKNIRHRNLVKILTSCSSTDFKGQEFKALVFEYMRNGSLESWLHPEKEIAGPQKTLNLAQRLNIIIDVASAFHYLHHECDQPVIHCDLKPSNVLLDDSMVAHVSDFGIAKLLPSIGVSLTQNSTVGIKGTIGYAPPEYGMGSEVSKFGDMYSFGVLMMEVLTGRRPTDEVFEDGQNLHDYVAISFPDNLIKILDPHLVSRDAEVAREGGNSENLTPSVEECLVSLFRIGLICSMESPKERMNIVDVTRELSIVRKAFLSANFLRT 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00821 1025 Pfam Leucine rich repeat N-terminal domain 41 79 IPR013210 -
Car08g00821 1025 Gene3D Transferase(Phosphotransferase) domain 1 794 1020 - -
Car08g00821 1025 SUPERFAMILY L domain-like 41 334 - -
Car08g00821 1025 PANTHER LRR RECEPTOR-LIKE KINASE 28 1020 - -
Car08g00821 1025 ProSiteProfiles Protein kinase domain profile. 712 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00821 1025 Gene3D Phosphorylase Kinase; domain 1 695 793 - -
Car08g00821 1025 SMART LRR_sd22_2 274 300 - -
Car08g00821 1025 SMART LRR_sd22_2 177 203 - -
Car08g00821 1025 SMART LRR_sd22_2 569 595 - -
Car08g00821 1025 SMART LRR_sd22_2 424 450 - -
Car08g00821 1025 SMART LRR_sd22_2 472 493 - -
Car08g00821 1025 SMART LRR_sd22_2 225 240 - -
Car08g00821 1025 SMART LRR_sd22_2 81 107 - -
Car08g00821 1025 SMART LRR_sd22_2 129 152 - -
Car08g00821 1025 CDD STKc_IRAK 718 1010 - -
Car08g00821 1025 SUPERFAMILY L domain-like 378 632 - -
Car08g00821 1025 Gene3D Ribonuclease Inhibitor 235 339 IPR032675 -
Car08g00821 1025 SUPERFAMILY Protein kinase-like (PK-like) 684 1010 IPR011009 -
Car08g00821 1025 Gene3D Ribonuclease Inhibitor 340 651 IPR032675 -
Car08g00821 1025 Pfam Leucine rich repeat 402 461 IPR001611 GO:0005515
Car08g00821 1025 Pfam Leucine rich repeat 251 311 IPR001611 GO:0005515
Car08g00821 1025 Pfam Leucine rich repeat 547 606 IPR001611 GO:0005515
Car08g00821 1025 Gene3D Ribonuclease Inhibitor 43 154 IPR032675 -
Car08g00821 1025 Gene3D Ribonuclease Inhibitor 155 222 IPR032675 -
Car08g00821 1025 Pfam Protein kinase domain 714 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00821 1025 ProSitePatterns Serine/Threonine protein kinases active-site signature. 843 855 IPR008271 GO:0004672|GO:0006468
Car08g00821 1025 SMART serkin_6 712 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00821 1025 PANTHER OS04G0122200 PROTEIN 28 1020 - -
Car08g00821 1025 SMART LRR_typ_2 274 297 IPR003591 -
Car08g00821 1025 SMART LRR_typ_2 448 472 IPR003591 -
Car08g00821 1025 SMART LRR_typ_2 496 521 IPR003591 -
Car08g00821 1025 SMART LRR_typ_2 129 152 IPR003591 -
Car08g00821 1025 SMART LRR_typ_2 569 592 IPR003591 -
Car08g00821 1025 SMART LRR_typ_2 153 177 IPR003591 -
Car08g00821 1025 PRINTS Leucine-rich repeat signature 475 488 - -
Car08g00821 1025 PRINTS Leucine-rich repeat signature 569 582 - -
Car08g00821 1025 ProSitePatterns Protein kinases ATP-binding region signature. 718 741 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00821 Car-Chr8 7343054 7362952 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00821 35 1021 Receptor kinase-like Gene Family AT3G47570 45.155 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Car08g00821 Pkinase 7.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00821 - - gmx:100785561 1314.29