Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00799 ATGCCACAGAATTGCATAGCACCAAAACCAGAAGAATACTTGAGTAGTCTCTCAGTGGAAGCATCACCACCAAATATGGCTGACACTCAAACAACTTCAACTGTCCTTACTTACCCCATTAGTACAAATGAACAATCATTAGTACCAAAACTTATTATGTATCCTATAACTTTAAAGTTTGAGGATTTGATATACAAAGTTAAACTAGAGCAAAAAGGAGGAACTTGTTGGGGAAGTAAATGGAGTTATAAAGAAAAAACTATACTAAATGGAATAACAGGTGTTGTGTGTCCAGGTGAAATACTAGCTATGTTAGGTCCATCAGGTAGTGGCAAAACAACACTCCTAACCGCTCTCGGCGGCCGTCTCAACGGTAAACTATCAGGAAAAATCACATACAACAATCAACCTTTCTCAGGTTCTATGAAAAGAAGAACAGGTTTTGTAGCTCAAGATGATGTGTTATACCCTCACCTAACTGTCACTGAAACTTTAGTCTTTACAGCACTTTTGAGGCTTCCTAAAACCTTAACAAGAGATGAAAAAGTTGAGCATGTAGAGAGAGTTATAACTGAGTTAGGACTAAACCTTTGTAGGAATAGTATGATAGGAGGACCACTTTTGAGAGGAATATCAGGTGGTGAAAAAAGGAGAGTGAGTATAGGACAAGAAATGCTTATTAATCCAAGTCTTTTGTTGCTTGATGAACCTACTTCAGGTTTAGATTCTACAACAGCTTTAAGGATCTTGAACACCATTAAAAAACTTGCTAGTGGTGGTAGAACTGTTGTTACAACAATTCATCAACCTTCAAGTAGACTTTACTATATGTTTGATAAAGTTGTGTTGCTATCTGAAGGCTGTCCTATATATTATGGTCCTGCTTCAACTGCTCTTGATTACTTCTCATCTGTTGGCTTTTCAACTTGCATCACTGTTAATCCAGCTGATCTCTTGCTTGATCTTGCTAATGGGATTGCTCCTGACTCAAAGCATGTAACTGAACAAAGTGAGGCACTGGAAAAGGAAAGGAAGATTGTGAGAGAATCTCTCATCTCTGCTTATGATAAGAACATAGCTACAAAGCTGAAAGCTGAAGTTTGCAACCTTGAGGTGAACAGCTACAACAAGAACACAAAAGATGCTTTCACAAGGAATCAAATAAAACCAGAACAATGGTGTACAAGTTGGTGGTATCAGTTCACTGTACTATTACAAAGAGGAGTTAAGGAGAGAAGGCATGAAGCCTTTAACAGGCTGAGAATATTCCAAGTCATAAGTGTAGCTTTTCTTGGTGGACTCTTGTGGTGGCATACACCAGAATCACACCTTGAAGATAGGACAGCTTTGCTTTTTTTCTTTGCTGTTTTCTGGGGATTCTACCCTCTCTACAATGCAGTTTTCACATTTCCACAAGAAAGAAGAATGCTAATCAAGGAACGGTCGTCGGGAATGTACCGTCTTTCTTCCTACTTTCTTGCAAGAACAATAGGAGACTTGCCACTAGAACTTGCACTTCCAACAGCATTTGTCATCATATTATACTGGATGGGAGGACTTAAACCTGATCTTGTGACTTTCATCCTTTCTCTTCTTGTTGTTCTCTACAGTGTTGTTGTCTCACAAAGTCTTGGACTAGCATTTGGTGCTATTTTGATGGAGGTTAAACAAGCAACAACACTAGCTTCTGTCACAACACTTGTTTTTCTCATTGCTGGAGGTTACTACATACAACAGATTCCACCTTTCATTGTGTGGCTTAAGTACTTAAGCTATAGTTACTACTGTTACAAGCTTCTTCTTGGTGTTCAATACAATGAAAATGATTATTATGAATGCTCAAAGGGAGAGTTATGCAAGGTTGTTGATTTTGGTCCAATTAAATCAATGGGATTGAATCATATGTGGGTTGATGTGTTCATCATGGCTTTGATGTTGGTTGGTTATAGATTAGTTGCTTATTTTGCACTTCATAGAGTTAGGTAG 1986 0.3817 MPQNCIAPKPEEYLSSLSVEASPPNMADTQTTSTVLTYPISTNEQSLVPKLIMYPITLKFEDLIYKVKLEQKGGTCWGSKWSYKEKTILNGITGVVCPGEILAMLGPSGSGKTTLLTALGGRLNGKLSGKITYNNQPFSGSMKRRTGFVAQDDVLYPHLTVTETLVFTALLRLPKTLTRDEKVEHVERVITELGLNLCRNSMIGGPLLRGISGGEKRRVSIGQEMLINPSLLLLDEPTSGLDSTTALRILNTIKKLASGGRTVVTTIHQPSSRLYYMFDKVVLLSEGCPIYYGPASTALDYFSSVGFSTCITVNPADLLLDLANGIAPDSKHVTEQSEALEKERKIVRESLISAYDKNIATKLKAEVCNLEVNSYNKNTKDAFTRNQIKPEQWCTSWWYQFTVLLQRGVKERRHEAFNRLRIFQVISVAFLGGLLWWHTPESHLEDRTALLFFFAVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVIILYWMGGLKPDLVTFILSLLVVLYSVVVSQSLGLAFGAILMEVKQATTLASVTTLVFLIAGGYYIQQIPPFIVWLKYLSYSYYCYKLLLGVQYNENDYYECSKGELCKVVDFGPIKSMGLNHMWVDVFIMALMLVGYRLVAYFALHRVR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00799 661 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 58 311 IPR003439 GO:0005524
Car08g00799 661 Pfam ABC transporter 90 239 IPR003439 GO:0005524
Car08g00799 661 ProSitePatterns ABC transporters family signature. 211 225 IPR017871 GO:0005524
Car08g00799 661 CDD ABCG_EPDR 55 293 - -
Car08g00799 661 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 32 659 - -
Car08g00799 661 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 32 659 - -
Car08g00799 661 Pfam ABC-2 type transporter 268 338 IPR043926 GO:0140359
Car08g00799 661 Gene3D - 78 305 IPR027417 -
Car08g00799 661 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 303 IPR027417 -
Car08g00799 661 SMART AAA_5 98 288 IPR003593 -
Car08g00799 661 Pfam ABC-2 type transporter 399 605 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00799 Car-Chr8 7119781 7122671 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00799 88 287 Calmodulin-binding Proteins AT2G36910 27.941 6.87e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00799 K05681 - gmx:100780191 1141.33