Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00797 ATGGGGAGTGACACGTGGAAAGCCCATTTTGGCATGGCGGTTGTGCAGCTATTATACGGTGGGTACCATGTAATTACTAAAGTAGCCCTTAATGTTGGAGTCAACCAGCTTGTCTTCTGCTTCTACAGAGATCTCCTTGCACTCTTTATTATTTCTCCTATTGCTTTTTTCAAAGAAAGACATACAAGGCCTCCTATTACTAAGAAACTATTGATGTCATTTTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAACTCTTGTTTCTTATTGGTTTAAGTTATACTAATCCAACTTATGCAGCTGCCTTACAGCCAGCTATTCCTGTCTTTACCTTTCTGTTGACTGTAATGATGGGTGTAGAAAGAGTGAACTTGCACAGTTTGGAAGGTCTGGCAAAGGTTGGAGGAACGCTTATATGTGTTTCGGGTGCCATATTGATGGTTTTATATCGCGGTCCGTCTTTGATAGGATATACAGAACTGGTCATTATACCGCCGAGCGAAATAAATGCTAAAGGGTTGTTGATTAATGGTTTACAGGATCTTGGATTAGATAATTTTGAACTTGGTGTCGTGTTCTTGATAGGGAACTGCATGTGCATGGCTGCTTTCCTAGCCATTCAGGCACCCGTGTTAAAAAAGTATCCTGCAAATCTATCTGTGACAGCATATTCATTCTTCTTCGGAGTTTTACTAATGGCGATAGTCTCGTTATTCACGGTTGATTTCTCAAGCGACTGGATTTTGACACAATCAGAAATACTTGCTGTTGTTTATGCCGGAACTATTGCATCTGCTTTTAACTATGGAGTCATTAGTTGGTCTAACAAGATATTGGGGCCAACTATAGTTTCCCTTTACAATCCACTTCAACCTGGTTTTTCTGCCCTACTGTCTCAAATATTCCTTGGAAGTCCAATTTACTTGGGAAGTATCATAGGGGGTTCTTTGATCATTGCTGGTCTTTATACTGTTACCTGGGCATCTTATAAAGAAAGACAGAAAATTGTTGGAATTTCTTCTGATGGCTCTTGCATCTCAGAACCACTTATTATTCATGAAAAAAGTGCACACCATAAAGTCAACACTCACTACTTTGTGTCTTCAACACCAAGCAAACCAAAGGAACAAACCATTCTCATCAGTAAACAAAAACTTGGTGGATTTCCAATGGCTGCTGCAGCTTCAGGATCAGTGGCGAGTGATATATGGAAATCCCATTTGGCAATGGCACTTGTGCAGTTATTCAATGGTGGCTACCATGTAATTACCAAAGTAGCCCTTAATGTTGGGGTTAACCAATTAGTTTTCTGTCTCTATAGAGATCTTCTTGCTCTTACTATCCTCGCTCCCATCGCTTATATTCGTGAAAAACGGACACGACCGATCATTACTAAGAACCTCCTGATGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAACTTCTTTTTCTTATCGGTTTAAGCTATACAAATCCAACTTATGCTGCTGCCATACAACCAGCGATTCCTGTCTTCACATTTTTGTTTGCCGTAATGATGGGTACAGAAAGAGTGAACTTGCTCAGATATGAAGGTCTGGCCAAAGTTGTAGGAACTCTTATCTGTGTTTCTGGTGCCATATTGATGGTTTTGTATCGCGGTCCAATTGTGATAGGATATACCGAAATTGATCATGTAACACAAAATGAAATTAGTGCCAAAGGTCAGCCTGAGCCTGCTGGATGGTTTGTCGGCGGTTTACAGGATCTTGGGCTAGACCATTTTCATCTTGGGGTTCTGTGCTTGATAGGGAACTGCATGTGCATGGCTGCTTTTCTAGCCATTCAGGCACCGGTATTAAAAAAATATCCGGCAAATCTATCTGTCACAGCATATTCATACTTCTTCGGAGCTGCTATGATGGTGACAGTGTCATTTTTAATGACTAACGAGTCAACTGACTGGAGTTTGACATCGTCAGAAATACTTGCTGTTATTTATGCTGGAACTATTGCATCTGCCCTTAACTATGGACTCATTACATGGTGCAACAAGATATTGGGGCCAGCTTTGGTTGCCCTATACAATCCACTTCAACCTGGCTTTTCTGCCCTACTGTCTCAGATTTTCCTTGGAAGTCCAATTTACTTGGGAAGCATCATAGGAGGGTCATTTATCATAGCTGGTCTATATACAGTTACTTGGGGATCATATAGAGAAAGACAGGCACCAGTTGGAGTTACTTCTCATGGTCCTTGGGTAGCTGAACCACTTATCCATGAAAAAAATGCATACCAAATAGGCCACTTATTTTCAGGGTCCTCTAGTGTATCCTCAAGTCCAAAGTTATCAGATTAA 2352 0.4073 MGSDTWKAHFGMAVVQLLYGGYHVITKVALNVGVNQLVFCFYRDLLALFIISPIAFFKERHTRPPITKKLLMSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAALQPAIPVFTFLLTVMMGVERVNLHSLEGLAKVGGTLICVSGAILMVLYRGPSLIGYTELVIIPPSEINAKGLLINGLQDLGLDNFELGVVFLIGNCMCMAAFLAIQAPVLKKYPANLSVTAYSFFFGVLLMAIVSLFTVDFSSDWILTQSEILAVVYAGTIASAFNYGVISWSNKILGPTIVSLYNPLQPGFSALLSQIFLGSPIYLGSIIGGSLIIAGLYTVTWASYKERQKIVGISSDGSCISEPLIIHEKSAHHKVNTHYFVSSTPSKPKEQTILISKQKLGGFPMAAAASGSVASDIWKSHLAMALVQLFNGGYHVITKVALNVGVNQLVFCLYRDLLALTILAPIAYIREKRTRPIITKNLLMSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAAIQPAIPVFTFLFAVMMGTERVNLLRYEGLAKVVGTLICVSGAILMVLYRGPIVIGYTEIDHVTQNEISAKGQPEPAGWFVGGLQDLGLDHFHLGVLCLIGNCMCMAAFLAIQAPVLKKYPANLSVTAYSYFFGAAMMVTVSFLMTNESTDWSLTSSEILAVIYAGTIASALNYGLITWCNKILGPALVALYNPLQPGFSALLSQIFLGSPIYLGSIIGGSFIIAGLYTVTWGSYRERQAPVGVTSHGPWVAEPLIHEKNAYQIGHLFSGSSSVSSSPKLSD 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00797 783 PANTHER WAT1-RELATED PROTEIN 406 773 IPR030184 GO:0016021|GO:0022857
Car08g00797 783 PANTHER WAT1-RELATED PROTEIN 8 367 IPR030184 GO:0016021|GO:0022857
Car08g00797 783 SUPERFAMILY Multidrug resistance efflux transporter EmrE 441 549 - -
Car08g00797 783 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 151 - -
Car08g00797 783 SUPERFAMILY Multidrug resistance efflux transporter EmrE 651 738 - -
Car08g00797 783 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 332 - -
Car08g00797 783 PANTHER NODULIN MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN 406 773 - -
Car08g00797 783 PANTHER NODULIN MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN 8 367 - -
Car08g00797 783 Pfam EamA-like transporter family 10 133 IPR000620 GO:0016020|GO:0016021
Car08g00797 783 Pfam EamA-like transporter family 408 548 IPR000620 GO:0016020|GO:0016021
Car08g00797 783 Pfam EamA-like transporter family 190 327 IPR000620 GO:0016020|GO:0016021
Car08g00797 783 Pfam EamA-like transporter family 595 732 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00797 Car-Chr8 7075608 7084863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00797 399 666 Nodulin-like Gene Family AT3G45870 69.403 9.95e-120 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00797 - - gmx:100787738 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00797 08 7075608 7084863 Car07g01724 07 17699773 17705781 PCT