Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00788 ATGTTGGCAAACAAAATGATAATTGATATGCCACCATCTGGGGCTCAAAGTGTGAGGACAAATAGATCTTCATATGGTTCTAGCATTGGCAATGAGGGTACTCCTTTACACAGCCATGCTACTGTTAGCAATGGTGATGACTATGACAGCGACGGCTCCAATTTCGCACCACCCACACCAACAACTCTATCAATGGCTATTCCAGCAGAACTCGCTGGAGCTGCACCCTTGATTGAAAGATTCCAGGTGGAAGGTTTTTTAAAATTGATGAAAAAGCAAATTCAATCTGCTGGAAAGCGAGGATTTTTTTCTAAAAGATCTGTGGGCCCTCAAGTTCGAGAAAAACTTACAATTGAAGACATGCTTTGCTTCCAAAAGGATCCAATACCAACATCATTGCTTAAGCTGAATGGTGATTTGGCAAGCCGTGCAACAAAACTGTTCCAGCTAATTTTGAAATACATGGGTGTTGATTCATCTGATCGTGGAACTCCACTAAGCTTAGAGGAGCAGGTTAATCTCGTAGGTAAACTATACAAGCAAAGTTTGAAGCGTTCAGAACTCCGAGACGAACTTTTTGTCCAGATATCAAAACAAACAAGAAACAATCCAGAGAGGGAATGCTTGATTAAAGCATGGGAGCTAATGTATTTATGCGCGTCGTGCATGCCTCCTAGCAAAGACATTGGAGGATATCTGTCAGAATATATTCATACTGTGGCGCATGGTGTGGCTGTCGATTCTAAGATCCGGGGCCTTGCACTGAATACATTAAATGCTATGAAACACTCTATCAAGGCTGGTCCTAGGCATATGATACCTGTTCCTAGTGAGATTGAAGCTCTGTTGATTGGGAAAAAGCTCACAACTATAGTCTTCTTTCTTGATGAAACATTTGAAGAAATTATGTATGACATGTCAACAACTGTTGCGGATGCTATTGAGGAACTTGCAGGGATCATTAAACTGTCAACATACTCTAGCTTTAGCTTGTATGAATTCCACAAAGTTGTCACAAGCTCCAAATCATCTGAGTCTGGGAATGAGGAGTACATAGGGTTAGATGAGAATAAACATATTGGGGATCTCGTCGCTGAATTTAAGGCAGTAAAAGATCGAAGTAAGGGAGAAATTTTGCACAGCAAACTGGTATTCAAGAAAAAGTTATTTCGTGAATCGGATGAAGCCGTGACAGATCCAATGTTTTTGCAGTTGTCCTATGTACAATTGCAGCATGATTATATTTTGGGTAATTATCCAATTGGAAGGGATGATGCATCCAAACTTTCTGCATTGCAAATCTTGGCTGAGATTGGATTTATTAGAAGACCTGAATCATGCGCAGAATGGAATTCATTTCTCGAGCGATTTCTTCCTAGGCAAATTGCAATGACTCGAGCTAGGCGGGAATGGGAGTTGGACATTCTTTCTTGCTATCATTCATTGGAGCATGTCACGAAAGAAGAAGCAAGACAACAATTTCTGCATATATTAAGAGCACTTCCGTATGGATTTTCTGTATTTTTCAATGTTCGCAGAATCGATGATCCTATTGGACTCCTACCTGGACGAATAATATTAGGAATTAACAAGAGAGGGGTTCATTTTTTTCGTCCGATTCCCAAGGAATATTTGCACTCAGCTGAATTGAGAGACATAATGCAATTTGGAAGCAGTAATACTGCTGTATTTTTTAAAATGCGAGTTGCAGGAGCTCTTCACATATTCCAGTTCGAAACCAAACAGGGAGAAGAAATTTGTGTAGCTCTCCAGACACATATAAATGATGTAATGCTGCGCCGATATTCCAAAACACGATCTTCTCCTACCGGTTCTTTGGATAAAGACATTTCTAGTGATTTCAAGCCTCCAAATTCAGAATTGTACGAGAAACGTGTTCAAGATTTAACAAAAGTTGTTGAAGATTCTCAAAGGAATGCTGATCAAttgctgcaaaaattgcatgagaagcaaaaacaagaggatgaattgcttcaagaattagaaggcttgaaagaatctttagaaacttccacgcacagtcttgcagaagttacaaacgaccgtgataggcttagatcgctatgtgatgaaaaggataatgaacttcagGCTAAAGTTATAGAGAAAAGGAGCTTGGACGCAAAGATAGCGAAGTTAAATAACCTGGTAGTAGAGAGGACTACCAATAAGGACCCCATTATAGTAAATGACCAAGTGTTGCAAAAACTTGAAGATGACTTGAAACTTTGTAGAGATGAGTGTATGGTAGCTGAAGAGACCATCAAAAGCTTGACAAATGAGAAGTTGATTTTGACACAAAAGCTATCTGAGCTTGAGAAGAAGAATGCTGAAGAGATTAATTCTCTTCAACGGAAACTCGAGCAAGAACACAAAGCTTTGAACACTCAAGTGCATGACCTGGAAAGAAAACTAAATGTGCTTAAACAAGAATTGGTTGTGGCCGAGTCTACACTTTCGATGAAGGACTCTGAATTGGTTGTGTTGAAGAACAACTTAAAAGAACTAGAAGATTTGAGAGAAATGAAAGAGGACATTGACAGAAAGAATGAACAAACAACTGCCATATTGAAGATGCAAGGAGCTCAACTAGCTGAAATGGAATCTCTTTATAAGGAAGAGCAAGTTCTCAGAAAGCGATATTTCAATACCATAGAAGATATGAAAGGCAAAATAAGAGTTTACTGTCGACTAAGACCTCTCAGCGACAAAGAAATTGCCGAGAAAGAAAAAGATGTTCTTACTTTTGTAGACGAGTTTACTGTCGAGCATCCATGGAAAGATGATAAACAAAAACAACACATATATGATCGTGTGTTTAATTGCGACATCACTCAACAAGAAGTATTTGAGGATACAAAGTACTTGGTGCAATCTGCTGTAGACGGTTATAATGTTTGCGTATTTGCTTATGGTCAAACCGGCTCTGGAAAGACGTTTACAATCTACGGATCTGAAAACAATCCCGGACTTACTCCACGTGCTACTGCAGAACTTTTTAGAATTTTAAGGAGAGAAAGTAACAAGTTTTCTTTTTCCTTGAAGGCTTACATGTTGGAATTATATCAAGATACACTTGTAGATCTTTTGTTACCTAAGAATGCAAAGCGATCGAAATTGGAGATTAAGAAGGATTCAAAGGGAATGGTAGCGGTCGAAAACGTAACAACTGTGTCAATTTCTACAATGGAGGAATTGAATAATATAATACAAAGAGGTTCTGAACGGCGACATACAGCAGGGACACAAATGAATGAAGAAAGCTCAAGATCTCATCTTATACTATCAGTTGTAATTGAAAGCACAAACCTTCAAAGTCAGTCGGCCGCAAGAGGAAAGCTGAGTTTTGTGGATCTTGCTGGGTCAGAAAGGATTAAAAAGTCAGGTTCTGAGGGTAGTCAACTGAAAGAAGCTCAAAGTATAAACAAATCATTATCAGCACTTGGAGATGTTATTAGTGCTTTATCTTCTGGTGGTCAACACATACCTTATAGAAATCACAAGTTAACTATGTTGATGAGTGATTCACTAGGAGGCAATGCCAAAACTCTCATGTTTGTTAATGTTTCTCCAATAGAATCAAGCTTGGATGAGACACATAACTCTCTCATGTATGCATCACGGGTGAGGTCGATTGTGAACGATCCGAGCAAAAATATTTCTTCGAAAGAGATAGCTCGACTGAAGAAATTAGTCACATACTGGAAAGAGCAAGCAGGTAAGAGAGGGGAGGATGATGATTTAGAAGAAATTCAAAATAAACGACCGACTAAAGAGAAGAACGAAGGCCATGGCCGCTTCACATTGTAG 3831 0.3741 MLANKMIIDMPPSGAQSVRTNRSSYGSSIGNEGTPLHSHATVSNGDDYDSDGSNFAPPTPTTLSMAIPAELAGAAPLIERFQVEGFLKLMKKQIQSAGKRGFFSKRSVGPQVREKLTIEDMLCFQKDPIPTSLLKLNGDLASRATKLFQLILKYMGVDSSDRGTPLSLEEQVNLVGKLYKQSLKRSELRDELFVQISKQTRNNPERECLIKAWELMYLCASCMPPSKDIGGYLSEYIHTVAHGVAVDSKIRGLALNTLNAMKHSIKAGPRHMIPVPSEIEALLIGKKLTTIVFFLDETFEEIMYDMSTTVADAIEELAGIIKLSTYSSFSLYEFHKVVTSSKSSESGNEEYIGLDENKHIGDLVAEFKAVKDRSKGEILHSKLVFKKKLFRESDEAVTDPMFLQLSYVQLQHDYILGNYPIGRDDASKLSALQILAEIGFIRRPESCAEWNSFLERFLPRQIAMTRARREWELDILSCYHSLEHVTKEEARQQFLHILRALPYGFSVFFNVRRIDDPIGLLPGRIILGINKRGVHFFRPIPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGALHIFQFETKQGEEICVALQTHINDVMLRRYSKTRSSPTGSLDKDISSDFKPPNSELYEKRVQDLTKVVEDSQRNADQLLQKLHEKQKQEDELLQELEGLKESLETSTHSLAEVTNDRDRLRSLCDEKDNELQAKVIEKRSLDAKIAKLNNLVVERTTNKDPIIVNDQVLQKLEDDLKLCRDECMVAEETIKSLTNEKLILTQKLSELEKKNAEEINSLQRKLEQEHKALNTQVHDLERKLNVLKQELVVAESTLSMKDSELVVLKNNLKELEDLREMKEDIDRKNEQTTAILKMQGAQLAEMESLYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPLSDKEIAEKEKDVLTFVDEFTVEHPWKDDKQKQHIYDRVFNCDITQQEVFEDTKYLVQSAVDGYNVCVFAYGQTGSGKTFTIYGSENNPGLTPRATAELFRILRRESNKFSFSLKAYMLELYQDTLVDLLLPKNAKRSKLEIKKDSKGMVAVENVTTVSISTMEELNNIIQRGSERRHTAGTQMNEESSRSHLILSVVIESTNLQSQSAARGKLSFVDLAGSERIKKSGSEGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPIESSLDETHNSLMYASRVRSIVNDPSKNISSKEIARLKKLVTYWKEQAGKRGEDDDLEEIQNKRPTKEKNEGHGRFTL 1276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00788 1276 CDD FERM_C_KCBP 506 611 - -
Car08g00788 1276 MobiDBLite consensus disorder prediction 1 57 - -
Car08g00788 1276 CDD FERM_B-lobe 403 501 IPR019748 -
Car08g00788 1276 SUPERFAMILY PH domain-like 508 596 - -
Car08g00788 1276 SUPERFAMILY Second domain of FERM 386 503 IPR035963 -
Car08g00788 1276 Coils Coil 741 863 - -
Car08g00788 1276 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 619 1269 - -
Car08g00788 1276 Coils Coil 626 674 - -
Car08g00788 1276 Gene3D - 506 613 IPR011993 -
Car08g00788 1276 PRINTS Kinesin heavy chain signature 970 991 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car08g00788 1276 PRINTS Kinesin heavy chain signature 1089 1106 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car08g00788 1276 PRINTS Kinesin heavy chain signature 1120 1138 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car08g00788 1276 PRINTS Kinesin heavy chain signature 1169 1190 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car08g00788 1276 Gene3D - 1222 1269 - -
Car08g00788 1276 ProSitePatterns Kinesin motor domain signature. 1119 1130 IPR019821 GO:0003777|GO:0005524|GO:0007018
Car08g00788 1276 SMART B41_5 284 508 IPR019749 -
Car08g00788 1276 Pfam FERM central domain 394 508 IPR019748 -
Car08g00788 1276 Gene3D Kinesin motor domain 885 1221 IPR036961 -
Car08g00788 1276 CDD KISc_C_terminal 896 1221 - -
Car08g00788 1276 SUPERFAMILY Prismane protein-like 841 915 IPR011254 GO:0003824|GO:0016491
Car08g00788 1276 SMART kinesin_4 896 1227 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car08g00788 1276 MobiDBLite consensus disorder prediction 1246 1276 - -
Car08g00788 1276 Pfam MyTH4 domain 177 281 IPR000857 GO:0005856
Car08g00788 1276 Coils Coil 682 702 - -
Car08g00788 1276 Gene3D - 400 501 IPR014352 -
Car08g00788 1276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 898 1246 IPR027417 -
Car08g00788 1276 ProSiteProfiles Kinesin motor domain profile. 898 1219 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car08g00788 1276 Pfam Kinesin motor domain 904 1219 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car08g00788 1276 ProSiteProfiles MyTH4 domain profile. 124 283 IPR000857 GO:0005856
Car08g00788 1276 Gene3D MyTH4 domain 103 284 IPR038185 -
Car08g00788 1276 MobiDBLite consensus disorder prediction 14 57 - -
Car08g00788 1276 SMART MyTH4_1 124 283 IPR000857 GO:0005856
Car08g00788 1276 PANTHER KINESIN-RELATED 619 1269 IPR027640 GO:0003777|GO:0007018
Car08g00788 1276 Gene3D - 287 391 - -
Car08g00788 1276 ProSiteProfiles FERM domain profile. 288 602 IPR000299 GO:0005856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00788 Car-Chr8 7004882 7013894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00788 44 1267 Calmodulin-binding Proteins AT5G65930 72.019 0.0 1788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00788 - - gmx:100782701 2080.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00788 08 7004882 7013894 Car07g01719 07 17648607 17657804 PCT