Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00787 ATGCTACCTCGCCGCCGCCGCCACAAATCCGACATGCCTTACCTCACCGCCGTCATCGGCATTCTTTTCTTCTTCCCGGCGGCAACCTCACAAGCTCAAATCCTCAAAACAGAAACTCACTTTTTCGGACCCTTCAACTCTACCAACGCCATCTATTTCGACGTTATACCCTCCGCATCGATTAACCTGGGCGCCCTTCAAGTTACGCCGGACAGCGCCGGAAGTTCATCAGTAGTCCCTCTCACCAACAACTCCGGCAGAATCTTTTTCAAAACCCCCTTCAAACTCTGGGACGATTCCTCCTCCGGCGCCGGAAAACTCGCCTCCTTCAACACCTCCTTCCTCATCAACGTCTTTCGTGTCAACAACGGAACACCCGGCGAAGGTCTCGCTTTCGTCATTGCACCTTCTCTCTCCATTCCTCTCAACAGCTCCGGCGGTTACCTTGGTTTAACAAACGCATCCACTGACGGTAACGTAACTAACCGTTTCGTCGCCGTTGAACTTGACACCGTCAAACAGGATTTCGACCCTGACAACAACCACATCGGACTCGATATAAACGGCGTCCGTTCCACCGTTAAAAATCCTCTTAACTTCGAAATCGCTCCAAACGGCACTCAGTTTTACGTTTTATGGATTGAATATAACGGTGACCGGAAACTTATTGAAGTCTACATGGAAACACAGTCTTCACCCGATTTACCTATAGTAAAAAAACCGGCTAAACCGGTTTTAAGTTCGAGTCTTGATCTAAAAAATGTAGTGAATCAAAAATCTTATTTCGGATTTTCCGCTTCAACGGGAAACACGGTTGAGTTAAACTGTGTATTAAGATGGAATATTTCAATCGAGGTTTTTGACGAGGGTAAAAATGGAAATTCATTGACAAttggtttaggtgttgggattcctgttttggttttgattttagcttgtgttggtggatttggatattgttATTACATGAAAAGGAAGGAGAGTGAAAATGGTTCTAATTCTCAGATATTGGGGACATTGAAGAGTCTACCGGGAACACCGAGAGAGTTTAAATATGAAGAATTGAAGAAAGCTACGAATAATTTTGATGAAAAGTTTAAACTTGGACAAGGTGGATACGGTGTCGTTTATAGAGGAATATTGGCGAAAGTGAAGGTGGAAGTTGCGGTTAAGATGTTTTCAAGGGATAAGATGAAAAGTACTGATGATTTTTTGGCTGAGCTTACTATTATCAACCGTCTTCGTCATAAACATCTTGTTAAGTTACAAGGATGGTGTCACAAAAACGGAGTATTGCTCTTAGTATACGACTACATGCCGAACGGAAGCTTAGATAACCACATATTTTGTGAGGAAGGAACAAGCACAACCCCTCTAAGTTGGCACCTAAGATACAAAATCTTATCAGGTGTAGCTTCTGCATTAAATTACCTACACAATGAATATGATCAAACAGTAGTCCACAGAGACCTTAAAGCCAGCAACATAATGCTGGACTCAGATTTCAACGCACGTTTAGGTGACTTTGGCTTAGCACGTGCACTAGAAAATGAAAAAACATCCTATGCAGAACTTGAAGGAGTACAAGGAACAATGGGATACATAGCACCAGAATGTTTCCACACAGGAAAAGCCTCAAGAGAATCAGATGTTTATGGACTTGGAGCTGTGTTACTAGAAGTTGTGTGTGGTCAAAGACCATGGACTAAAATTGAAGGCTATCAATTTTTAGTTGATTGGGTTTGGTATTTGCATCGCGAAGGAAGGTTATTAGAAGCGGTGGATCCAAGAGTTGGGAATGAGTATGTGGTTGAAGAGGCAGAGAGGATATTGAAATTGGGTTTGATTTGTTCTCACCCTATTGCAAGTGAGAGACCTAAAATGCAGACAATTGTTCAGATCATATCTGGGTCAGTGAATGTGCCGGACGTGCCGCCTTTTAAGCCTGCTTTTATGTGGCCATCTGTGGACTTAGCTAGTCTTGCAAGTACTGATTATACAGGAACAAATACTAGTGGCTTCACACCAATCAATAGTAACACACAAACTTCTATGCGTGTTGAATTCTCAGATACTAGCTCTCTTGTCTAA 2091 0.4146 MLPRRRRHKSDMPYLTAVIGILFFFPAATSQAQILKTETHFFGPFNSTNAIYFDVIPSASINLGALQVTPDSAGSSSVVPLTNNSGRIFFKTPFKLWDDSSSGAGKLASFNTSFLINVFRVNNGTPGEGLAFVIAPSLSIPLNSSGGYLGLTNASTDGNVTNRFVAVELDTVKQDFDPDNNHIGLDINGVRSTVKNPLNFEIAPNGTQFYVLWIEYNGDRKLIEVYMETQSSPDLPIVKKPAKPVLSSSLDLKNVVNQKSYFGFSASTGNTVELNCVLRWNISIEVFDEGKNGNSLTIGLGVGIPVLVLILACVGGFGYCYYMKRKESENGSNSQILGTLKSLPGTPREFKYEELKKATNNFDEKFKLGQGGYGVVYRGILAKVKVEVAVKMFSRDKMKSTDDFLAELTIINRLRHKHLVKLQGWCHKNGVLLLVYDYMPNGSLDNHIFCEEGTSTTPLSWHLRYKILSGVASALNYLHNEYDQTVVHRDLKASNIMLDSDFNARLGDFGLARALENEKTSYAELEGVQGTMGYIAPECFHTGKASRESDVYGLGAVLLEVVCGQRPWTKIEGYQFLVDWVWYLHREGRLLEAVDPRVGNEYVVEEAERILKLGLICSHPIASERPKMQTIVQIISGSVNVPDVPPFKPAFMWPSVDLASLASTDYTGTNTSGFTPINSNTQTSMRVEFSDTSSLV 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00787 696 Pfam Protein kinase domain 364 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00787 696 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 18 658 - -
Car08g00787 696 ProSitePatterns Protein kinases ATP-binding region signature. 368 391 IPR017441 GO:0005524
Car08g00787 696 ProSitePatterns Legume lectins beta-chain signature. 165 171 IPR019825 -
Car08g00787 696 SMART serkin_6 362 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00787 696 Gene3D - 38 297 - -
Car08g00787 696 PANTHER - 18 658 - -
Car08g00787 696 SUPERFAMILY Protein kinase-like (PK-like) 344 658 IPR011009 -
Car08g00787 696 SUPERFAMILY Concanavalin A-like lectins/glucanases 45 286 IPR013320 -
Car08g00787 696 ProSiteProfiles Protein kinase domain profile. 362 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00787 696 CDD STKc_IRAK 368 635 - -
Car08g00787 696 Pfam Legume lectin domain 42 286 IPR001220 GO:0030246
Car08g00787 696 Gene3D Phosphorylase Kinase; domain 1 347 438 - -
Car08g00787 696 CDD lectin_legume_LecRK_Arcelin_ConA 39 281 IPR001220 GO:0030246
Car08g00787 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Car08g00787 696 Gene3D Transferase(Phosphotransferase) domain 1 439 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00787 Car-Chr8 6999360 7003312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00787 79 668 Receptor kinase-like Gene Family AT5G55830 38.854 1.20e-128 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Car08g00787 Pkinase 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00787 - - gmx:100780014 1003.05