Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00766 ATGACACGAGCGCTGAGAATTCTTCAATCAACAGAAAACGTCACCGCCATCGTAGTGGCGGCGCCGCCGCCGGAGGCTGTGGCTTTGGAATCAGACTTCGTGGTGATTCTTGCAGCCTTACTCTGCGCCTTGATATGCGTCGTCGGATTAGTCGCCGTCGCCCGGTGCGCGTGGCTCCGACGAGACTCCGGTGCCGGAAACTCGCCGCAGCAAGCTTTAGCTAACAAAGGACTGAAGAAAAAGGTTCTTCAATCTCTTCCGAAATTCGCCTACGTTGATAGCACCCCTGGAAAATGGTTGGCGACGTCGGAATGCGCGATTTGCTTGTCGGAGTTCACCGCCGGCGACGAAATCCGTGTGCTACCGCAGTGTGGACACGGATTCCATGTCGCTTGCATAGACACGTGGCTTGGGTCCCACTCTTCCTGCCCTTCCTGTCGGCAGATTCTGGCGGTGACGAGGTGTCAGAAGTGTGGCAGGTTTCCGGCGACCGGAGCTGAAGCCGCCGGCGTTGCAGTTAGTGAACCGGATTTGAAATCCAGAGAAGATGACAATGTCGGTGCAaatagtaatgagggaggtgttagtagtagtaatagtaataATTCTGTAGATCACATCCACATCAGTGTAAACAGTGGGTTCTTGCCTTAA 654 0.5183 MTRALRILQSTENVTAIVVAAPPPEAVALESDFVVILAALLCALICVVGLVAVARCAWLRRDSGAGNSPQQALANKGLKKKVLQSLPKFAYVDSTPGKWLATSECAICLSEFTAGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILAVTRCQKCGRFPATGAEAAGVAVSEPDLKSREDDNVGANSNEGGVSSSNSNNSVDHIHISVNSGFLP 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00766 217 SMART ring_2 105 146 IPR001841 -
Car08g00766 217 MobiDBLite consensus disorder prediction 172 205 - -
Car08g00766 217 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 152 IPR013083 -
Car08g00766 217 SUPERFAMILY RING/U-box 83 152 - -
Car08g00766 217 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 191 - -
Car08g00766 217 CDD RING-H2_PA-TM-RING 104 147 - -
Car08g00766 217 Pfam Ring finger domain 104 147 IPR001841 -
Car08g00766 217 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
Car08g00766 217 MobiDBLite consensus disorder prediction 187 205 - -
Car08g00766 217 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00766 Car-Chr8 6733952 6734982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00766 1 186 C3H Transcription Factor Family AT1G76410 57.653 3.84e-65 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00766 - - gmx:100787383 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00766 08 6733952 6734982 Car07g01696 07 17325372 17326418 PCT