Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00753 ATGGGAGGCTTGTTACAGTTTTTTGAATTCAATCAAGGGAGGATGGCAAAGAAAGTCCATGCTCACAAGAGACATCATGTTGGCCTTGAAACTCCTCGAAATAGTCTAGATCTTGAAGTAGAAACATCTCAGAAGTACGGTCCACAAGGAGAATTACCGCACTATTATCAAGTAGAAGAAGACTGGTCTGCAAATAATTGTTATTCAAATGCGGGTTCGATGAAAAAGCTGATCAATGAAGAGCTATCTGAACGATCGAGCACCAGGCAAAAGGCACCAAGTCTTGTGGCAAGGTTGATGGGGATAGATATGATGCCGGTAGACACTAAATCTGTTGCTCTATCAGATAGAAGAATAAGTGAAAATATCGGGAAGAAGTTTTCAAACAAGAGAACAAATGGAAGGAGTTCAGTTAGTTTGGAATGTTCCAACTTTAATTCTTCTAGACATACTGAATTCGATTCGTTTTGTAAAGTTATtgatgatgatgatgatgatgatgatgGATGGAGCCGGAGTTTTGGAAAACCAAGGCCAAGGGAACATCCACAGGAAGAGGAACTTCAGAAATTCAAGAAAGAGTTTGAAGCATATCAAGCAACAAGGTTTCAAGAATGTTCAAAGTTTGTTGAAATCGGAAGTGTTTCTAGCCGATTTCTTGTTCAAGAGAATCTGAACAAGGAAAAGGTTGCACATAACAATACAAGTATGCAAAGGAAAATCTTTTTTCCTTCAAAGAGCAGAACTTTAAGTAGAGACTTTGAAGAGTCCTTGATGATGAAATCTTATAACAGATTAGATACATCTTCTTCGCCGACGCGAATAGTTATCTTGAAGCCTGGTCCTGATAATAGCACATGCAATCATGAAGAGAATTGGACTAATTCATCAGAAACATTACCAGGTAGACATAGTATAGAAGATTTTCTTGAGGAGGTGAAAGAGCGTTTGAAATGCGAACTGCAAGGAAAAACGGTCGGAAAAAAAGGTTCTGAGACAGTGTTAAATAAAAAACCATCTGATCCTAAAGTTATAGCTCATCAAATTGTAAAGCAAGTCAGAGAAAATGTGACTAGAGATGCTGACTCAAATTCGGGCTGCTCAGAATCAACAAGGTCATACAAAGATGAAATGCAGTTCAATGGACTGAGTTTTCCCGAATTTATCAGTAGAGATACAAGGAGGTTCTTATCAGAGAGGCTAAGAAATGTGGTGAAAAGTGAAAGACATGACGATATTTCTGAGGTGAATTCAAGATCAAATGCATTTTACAATCACAGAATTAGACTCAAACAGAATGGAAATATTTTGAAGTGTGCAAATGATTGGGAAATATCGAAAGACGAAACAGAAATACAAACAGGATCTTTCAGGCATGAACTTAATGATAATAACATACTGTTCCACAGGGAATTGTCACCTAGGAACCTTGTAAGATCCTTGTCTGCTCCTGTATCAAGATCAGGAACATCATTTGGAAAGCTTCTTCTAGAGGATCGCCACATATTAACCGGTGCTCATATTCGGCGGAAGCTTGAAGCTGTTGAAACTATGTCTGTTGATGTTAAGAAACAGAAAAAAGAGAGATTTAATAATATTAAAGAAAAGGTCTCCAATTTTAGATACAGTTTTGCTCTCAGAGGGAGGCTTTTTGGCAAGAGAGGTCAATCAATGGGAGAATCACATGGCGATGAATACCGTCGTGCAGTGAGAGATATCACAAGTGGTCCAACAGTTCTTATGAACTGTGGTGATGAGAGACATGAGAACTACACTGAAGTACCTCCTAGTCCTGCATCTGTGTGTAGCAGTGTTCATGAAGACTTTTGGAGGCGGACCGAATATTTAAGTCCAATATCAACTCCTGATGTGTCCTCAAGAGATGATACTGTTGTGCCTCAAGTTTTCAGAGACATCAGCTCTGGTTTAAATGAGCTAAGGAGACAACTCAATCAGCTTGATTCTGATGTTCCCGAGGACTTCGCTATGAAGCAAGAACCTACTGAGTCTGAATTGGTGCAATTAAAGGATCCAGCAGAATCTTACATAAGAGATTTACTTGTTGCTTCTGGTTTATACTTTGGTTCTTGGGATAAATCTTTGTTAAGAGGGGACACATATGCAAAGCCTATTGGGAAATCAGTTTTTGAAGAAGTGGAAGAATCTCATAAGAAATTGATCAAGGAGAATGATGAAAATTTTATGAAGGATCAAAGTGAGAATAAGTTACAAGACCACAAGATTTTGCTTGATTTGTTAAATGAGGCACTTTCAGTTGTTCTTGGACCACCTTTGACATTGTCTAGATTCAAAAGGAAATTATGCAACTCTTCGACGATGTCGCCGCCTCAAGGAAACGAGCTTTTGAACTTAGTATGGGAGAGTATTCGAGATTCGTTGTATCTTTCGTCCGACATATGTTATTATTCAGTTGATAGTTTGGTGTCTCAACACCTGAGATCCATTCCTTGGTCTGGAATAATCAATGATGAGATCAATATATTGGAAAGAGAGATAGAATGTCTTATAACTAATGATCTTGTTGATGAACTCACAAAGGATTTGCTATGA 2571 0.3788 MGGLLQFFEFNQGRMAKKVHAHKRHHVGLETPRNSLDLEVETSQKYGPQGELPHYYQVEEDWSANNCYSNAGSMKKLINEELSERSSTRQKAPSLVARLMGIDMMPVDTKSVALSDRRISENIGKKFSNKRTNGRSSVSLECSNFNSSRHTEFDSFCKVIDDDDDDDDGWSRSFGKPRPREHPQEEELQKFKKEFEAYQATRFQECSKFVEIGSVSSRFLVQENLNKEKVAHNNTSMQRKIFFPSKSRTLSRDFEESLMMKSYNRLDTSSSPTRIVILKPGPDNSTCNHEENWTNSSETLPGRHSIEDFLEEVKERLKCELQGKTVGKKGSETVLNKKPSDPKVIAHQIVKQVRENVTRDADSNSGCSESTRSYKDEMQFNGLSFPEFISRDTRRFLSERLRNVVKSERHDDISEVNSRSNAFYNHRIRLKQNGNILKCANDWEISKDETEIQTGSFRHELNDNNILFHRELSPRNLVRSLSAPVSRSGTSFGKLLLEDRHILTGAHIRRKLEAVETMSVDVKKQKKERFNNIKEKVSNFRYSFALRGRLFGKRGQSMGESHGDEYRRAVRDITSGPTVLMNCGDERHENYTEVPPSPASVCSSVHEDFWRRTEYLSPISTPDVSSRDDTVVPQVFRDISSGLNELRRQLNQLDSDVPEDFAMKQEPTESELVQLKDPAESYIRDLLVASGLYFGSWDKSLLRGDTYAKPIGKSVFEEVEESHKKLIKENDENFMKDQSENKLQDHKILLDLLNEALSVVLGPPLTLSRFKRKLCNSSTMSPPQGNELLNLVWESIRDSLYLSSDICYYSVDSLVSQHLRSIPWSGIINDEINILEREIECLITNDLVDELTKDLL 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00753 856 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 855 - -
Car08g00753 856 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 855 - -
Car08g00753 856 MobiDBLite consensus disorder prediction 169 186 - -
Car08g00753 856 Coils Coil 856 856 - -
Car08g00753 856 Pfam DUF761-associated sequence motif 86 106 IPR032795 -
Car08g00753 856 Coils Coil 736 756 - -
Car08g00753 856 MobiDBLite consensus disorder prediction 165 186 - -
Car08g00753 856 Pfam Domain of unknown function (DUF4378) 681 850 IPR025486 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00753 74 855 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 40.368 3.76e-149 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00753 - - gmx:100779720 1182.55