Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00749 ATGACGTGGCATCAAAATTTCACCATCCCGCGCAAACCCGGACTTCAATTTTTTTCCTTTTCAACATTTTTGGGTGCCCTTATTATCCCTCGCGCTCACAACCAAAAAACGCATCCATTTCTTCAACAATACCAAACACTCTCCAAAAACCCTCACACCTCTCTCTCGCCGTTTCTCTCCCCAACCGCCATGCCTAAGGCTAGCACCGTCGCCAAACCCGCCGATAGCCGGTTGAAGCGAAAGGGCGCTGGAACCGGTACAAAGCAGTCGAAGAAGGCTTCCAAGGATCCTAACAGACCGAAGAGGCCTCCAAGTGCTTTCTTCGTTTTCATGTCTGAATTCAGAGAGACTTTTAAGAAGGAGAATCCTAACAACAAATCCGTTGCTGTGgttggcaaagctggtggcaaagaatggaaatcgttgtcaactgctGATAAGGCTCCTTACGTTGAGAGGGCAGAAAAGTTGAAAGAGGAGTATGAGAAGACTCTTCGTGCTTACAATATTGGATTGGCTGAGGGGAAAACTCCTTCAGAGGAAGAAGGATCCGACAAGTCAAAGTCTGAAGTCAACGATGACGATGAAGATGATGATGAAGATGACGAGTAA 612 0.4346 MTWHQNFTIPRKPGLQFFSFSTFLGALIIPRAHNQKTHPFLQQYQTLSKNPHTSLSPFLSPTAMPKASTVAKPADSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIGLAEGKTPSEEEGSDKSKSEVNDDDEDDDEDDE 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00749 203 MobiDBLite consensus disorder prediction 52 105 - -
Car08g00749 203 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 67 202 IPR031061 -
Car08g00749 203 MobiDBLite consensus disorder prediction 170 203 - -
Car08g00749 203 CDD HMGB-UBF_HMG-box 100 166 - -
Car08g00749 203 Gene3D High mobility group box domain 84 182 IPR036910 -
Car08g00749 203 SUPERFAMILY HMG-box 88 169 IPR036910 -
Car08g00749 203 SMART hmgende2 99 170 IPR009071 -
Car08g00749 203 Pfam HMG (high mobility group) box 100 169 IPR009071 -
Car08g00749 203 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 100 169 IPR009071 -
Car08g00749 203 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 67 202 - -
Car08g00749 203 Coils Coil 151 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00749 Car-Chr8 6608311 6610002 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Car08g00749 HMG_box 1.9e-23 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00749 K25507 K22507 gmx:100499992 189.504