Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00745 ATGGATTCCTCTCTCACTAACCTACTTCTCTTCAACAACACCATTCAACCAGAGTTGATTAGAAGTGTGCATGTGTACCGTGAatgtgatgatgatgatgatgttgttgaagaAAGGGAAGTTGAAAGAGAGTTTGTTTTTTCTGAGAGTGGTTCCTATGTTGAAATGCAAGCTACCCCAATTCTTAATTTGATGAAATCTCGTCTCTTTCAAGAGGTTTTTGAAGGGTATATGAATGGAGTGTGGCTTTGTATCTTTGCTTTTCATGCTTTTAACACCCCTCCATTTTCTCACATTCCAACCCTTTTCTTGCTCACAAGAAATCCAAAGCTTCAAGCTATTCCAAACTTGCTTAATGATCTCCAAATGATATACAAGTTGGACCCAAAGGAGGAACACAAAGATACACCAGAGAAAAAAGTCTTGCCTGTGCTTGATCAAGACCTCAATTGTCTCCCTTTTGAAGAAGACGAGTCCGAGTTACCAGATGATGAGACAGATGTTGAAAGTTCATCAGGTTCGGCAGGAAAGAAAAAGAGGGCACCTAGTGACCATGTAGCGAAAATTACTTTATCAGATTTGGTCAAGTACTTCGATATGCCGATTGTAGAAGCGTCGAAAAATCTAAATGTTGGGCTTACTGTTCTCAAAAGAAAGTGCAGAGAATTCGGAATTCCTCGCTGGCCTCATAGGAAGAACAAATCACTTGACAGNNNNNNNNNNATTCCTCGCTGGCCTCATAGGAAGATCAAATCACTTGACAGTCTCATTCATGATCTTCAGGAAGAGGCTAAACATCAGGAAATGGAGGATAAAGCTGCAGCAATGGCAGTGATAAGGAGGCAAAAGATGTTGGAAAATGAAAAGGAAAACATAGAGAAGAAACCCTTCATGGACATACAAAGTGAGACAAAGAGATTCAGGCAAGATGTTTTCAAGAGAAGGCACAGAGCTAGAGCTATTGAAAAACATAATTCTACAGTAGCAAGCACTTAA 996 0.3855 MDSSLTNLLLFNNTIQPELIRSVHVYRECDDDDDVVEEREVEREFVFSESGSYVEMQATPILNLMKSRLFQEVFEGYMNGVWLCIFAFHAFNTPPFSHIPTLFLLTRNPKLQAIPNLLNDLQMIYKLDPKEEHKDTPEKKVLPVLDQDLNCLPFEEDESELPDDETDVESSSGSAGKKKRAPSDHVAKITLSDLVKYFDMPIVEASKNLNVGLTVLKRKCREFGIPRWPHRKNKSLDXXXXIPRWPHRKIKSLDSLIHDLQEEAKHQEMEDKAAAMAVIRRQKMLENEKENIEKKPFMDIQSETKRFRQDVFKRRHRARAIEKHNSTVAST 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00745 331 Coils Coil 250 270 - -
Car08g00745 331 PANTHER PROTEIN RKD5 242 324 - -
Car08g00745 331 PANTHER PROTEIN RKD5 7 238 - -
Car08g00745 331 Pfam RWP-RK domain 188 236 IPR003035 -
Car08g00745 331 Coils Coil 275 295 - -
Car08g00745 331 PANTHER PROTEIN RKD4 242 324 IPR044607 GO:0003700
Car08g00745 331 PANTHER PROTEIN RKD4 7 238 IPR044607 GO:0003700
Car08g00745 331 ProSiteProfiles RWP-RK domain profile. 171 273 IPR003035 -
Car08g00745 331 MobiDBLite consensus disorder prediction 156 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00745 Car-Chr8 6581607 6584408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00745 15 331 AtRKD Transcription Factor Family AT4G35590 45.977 5.75e-87 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Car08g00745 RWP-RK 3.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00745 - - gmx:100306328 425.246