Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00741 ATGGAAAACTCTTCCAACAACAGTTCTCCTCAACACAGTCCCTCTGAAGGAGAAACAATGTTGAAAACACCTGAAACAGTTCTAGCTGAATTAAGTGGTGGTGATGATGGTGCTAGTGACAGTGACATTGAAGAAGGAGAAGTTTTCAAAAAGAGAAAGAACACTCAAGTGAAAAACCCTCCATCTGGAAAACCAATTTGTCCTGAATGCAAAAAAGAGTTTTCCACGTGGAAGGCTGCGTTTGGTCACATGCGCAAACACCCCGAACGCACTCATCGCGGTTTTTTTCCTCCTCCCACTTTTAAATCTAATTATTCCTCAACCAACATTGCACCCGAGGGCGATGGTGATAATTTAAGTGAAGGTGTGACATCAATTGTTCGAGAGCTTTTGTTTGATTTGAATAGATCTATTTATGAAACAGAAGCTGGATCCTCTACTAATGCTGCACCTACTGAAAATCAAGAGGGGAAGAAGACAAAGGGTTTCGATTTAAATGAGTTGCCATCCTCAGAAGACGATGAAACACAAGACAATTAA 540 0.4093 MENSSNNSSPQHSPSEGETMLKTPETVLAELSGGDDGASDSDIEEGEVFKKRKNTQVKNPPSGKPICPECKKEFSTWKAAFGHMRKHPERTHRGFFPPPTFKSNYSSTNIAPEGDGDNLSEGVTSIVRELLFDLNRSIYETEAGSSTNAAPTENQEGKKTKGFDLNELPSSEDDETQDN 179
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car08g00741 179 ProSitePatterns Zinc finger C2H2 type domain signature. 67 87 IPR013087 -
Car08g00741 179 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 41 178 - -
Car08g00741 179 MobiDBLite consensus disorder prediction 141 155 - -
Car08g00741 179 MobiDBLite consensus disorder prediction 1 20 - -
Car08g00741 179 MobiDBLite consensus disorder prediction 1 69 - -
Car08g00741 179 PANTHER TRANSCRIPTION REGULATORY PROTEIN SNF2-LIKE 41 178 - -
Car08g00741 179 MobiDBLite consensus disorder prediction 85 117 - -
Car08g00741 179 MobiDBLite consensus disorder prediction 100 114 - -
Car08g00741 179 MobiDBLite consensus disorder prediction 141 179 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Car08g00741 Car-Chr8 6545058 6545706 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00741 67 102 C2H2 Transcription Factor Family AT4G35280 58.333 2.40e-10 56.2
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car08g00741 None None None
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00741 - - cam:101493706 357.066