Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car08g00741 | ATGGAAAACTCTTCCAACAACAGTTCTCCTCAACACAGTCCCTCTGAAGGAGAAACAATGTTGAAAACACCTGAAACAGTTCTAGCTGAATTAAGTGGTGGTGATGATGGTGCTAGTGACAGTGACATTGAAGAAGGAGAAGTTTTCAAAAAGAGAAAGAACACTCAAGTGAAAAACCCTCCATCTGGAAAACCAATTTGTCCTGAATGCAAAAAAGAGTTTTCCACGTGGAAGGCTGCGTTTGGTCACATGCGCAAACACCCCGAACGCACTCATCGCGGTTTTTTTCCTCCTCCCACTTTTAAATCTAATTATTCCTCAACCAACATTGCACCCGAGGGCGATGGTGATAATTTAAGTGAAGGTGTGACATCAATTGTTCGAGAGCTTTTGTTTGATTTGAATAGATCTATTTATGAAACAGAAGCTGGATCCTCTACTAATGCTGCACCTACTGAAAATCAAGAGGGGAAGAAGACAAAGGGTTTCGATTTAAATGAGTTGCCATCCTCAGAAGACGATGAAACACAAGACAATTAA | 540 | 0.4093 | MENSSNNSSPQHSPSEGETMLKTPETVLAELSGGDDGASDSDIEEGEVFKKRKNTQVKNPPSGKPICPECKKEFSTWKAAFGHMRKHPERTHRGFFPPPTFKSNYSSTNIAPEGDGDNLSEGVTSIVRELLFDLNRSIYETEAGSSTNAAPTENQEGKKTKGFDLNELPSSEDDETQDN | 179 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car08g00741 | 179 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 67 | 87 | IPR013087 | - | |
Car08g00741 | 179 | PANTHER | ZINC FINGER PROTEIN ZAT2-RELATED | 41 | 178 | - | - | |
Car08g00741 | 179 | MobiDBLite | consensus disorder prediction | 141 | 155 | - | - | |
Car08g00741 | 179 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Car08g00741 | 179 | MobiDBLite | consensus disorder prediction | 1 | 69 | - | - | |
Car08g00741 | 179 | PANTHER | TRANSCRIPTION REGULATORY PROTEIN SNF2-LIKE | 41 | 178 | - | - | |
Car08g00741 | 179 | MobiDBLite | consensus disorder prediction | 85 | 117 | - | - | |
Car08g00741 | 179 | MobiDBLite | consensus disorder prediction | 100 | 114 | - | - | |
Car08g00741 | 179 | MobiDBLite | consensus disorder prediction | 141 | 179 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car08g00741 | Car-Chr8 | 6545058 | 6545706 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car08g00741 | 67 | 102 | C2H2 Transcription Factor Family | AT4G35280 | 58.333 | 2.40e-10 | 56.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Car08g00741 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car08g00741 | - | - | cam:101493706 | 357.066 |