Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00740 ATGACAGCGGATGGTTCGGGTGTGGTGGTGGgagtaggaggaagaggaagagtgagagaagGTGGACAACCTTTGAAGAAAAGAAAGAGTAATGATGTGAAAGACCCTCCTCCGGGAAAACCAACTTGTCCTGAATGCAAAAGAGAGTTTTTCACATGGAAGGCTGCATTTGGACACATGCGAAAACACCCTAACCGTGCTCACCGTGGTTTTTTTCCACCTCCTGTTTTTAGTTCCTCTTCTACTGCCACAATCAACCCACCTGCACCTCAACCTATTCAAAATGAGGGTGATGGTGAAAACCGTGCAATGGAAATTGAGGCGGGTCCCTCTGTTGCTGCTGCCGCTGCACCTGAGCCTGATGCTGAAGAGAAGATTGAAGAACGCAAGAATTTAGGATTCGACTTGAACAAGATGCCTCCCAATGAAGAAGATGAAGTGTGA 444 0.4414 MTADGSGVVVGVGGRGRVREGGQPLKKRKSNDVKDPPPGKPTCPECKREFFTWKAAFGHMRKHPNRAHRGFFPPPVFSSSSTATINPPAPQPIQNEGDGENRAMEIEAGPSVAAAAAPEPDAEEKIEERKNLGFDLNKMPPNEEDEV 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00740 147 MobiDBLite consensus disorder prediction 66 98 - -
Car08g00740 147 MobiDBLite consensus disorder prediction 20 35 - -
Car08g00740 147 MobiDBLite consensus disorder prediction 110 147 - -
Car08g00740 147 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 20 146 - -
Car08g00740 147 ProSitePatterns Zinc finger C2H2 type domain signature. 43 63 IPR013087 -
Car08g00740 147 MobiDBLite consensus disorder prediction 75 91 - -
Car08g00740 147 MobiDBLite consensus disorder prediction 120 134 - -
Car08g00740 147 PANTHER TRANSCRIPTION REGULATORY PROTEIN SNF2-LIKE 20 146 - -
Car08g00740 147 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00740 Car-Chr8 6539516 6540850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00740 33 127 C2H2 Transcription Factor Family AT4G35280 31.373 9.49e-11 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car08g00740 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00740 - - cam:101493386 278.1