Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00716 ATGGTGATCGAACAAGACATTGAAAGCTGCGGAAGCAGAGCAGTGCAGTCGCATCCGAATCCTCGCCATCACCGTCAGAAACTTGAGGTGTACAATGAGGTTCTTCGTCGAATTCAGGATTCCGATTGTGAAGAGGCTCATGTTCCTGGTTTCGATGATCAATTATGGCTTCACTTCAATCGTCTTCCTGCTAGGTATGCATTGGATGTGAATGTGGAGAGGGCAGAAGATGTTCTTGCTCATAAGAGATTGCTCAAGTTAGCAGAGGATCCTGCTAATCGACCTGCATTTCAAGTTCGATTAGTACAGGTATATCCTTTTGCTAATGCAAATTATATTGATTCTTCCGTGCATTCAGATACTTCTGAGAAAGAAGATGCACAGAGTTCTCTTAACTATTCTTTAAAACAGGGaattcatccACCACCCACCTTTGGTTCTTCCTCTAATCTTGAAGCTCTTGCACTTCAAACAAATAAAAATAACATTGAAGATGGAGACAATGCTATGGGCGTGACAGCAAATTTTAACCGGCCCATGCACGAGATTACCTTTTCAACAGTTGATAAACCTAAACTCCTTAGTCAGTTAACTTTGATACTTGGTGAGATTGGACTGAATATTCAAGAAGCTCATGCATTTTCCACCTCTGATGGGTTTTCCTTGGATGTCTTTGTCGTTGAGGGATGGCCTAATGAGGAAACTGAGGAACTTAAAGGTGTGTTGGAAAAGGAAATTTGGAAGGTTAAGGACCAATATCTGTCAAATCAAGGCATACTTTATGCTTTCAATGATCCAAACCATACAACAATGGAATCCTCCCCTCCTTGCATACAAATACCATCTGATGGAGCTGATGTTTGGGAAATTGATACCAGCCAGCTAAAATATGAAAACAAAGTTGGCTCTGGATCATTTGGTGACTTGTTCAGAGGCACATATTGCAGTCAAGATGTGGCTATCAAAGTTCTTAAGCCTGAACGCATAAGCACAGATATGCTGAAAGAGTTTGCACAGGAAGTTTATATCATGAGGAAGATTCGACACAAGAATGTTGTTCAGTTCATTGGTGCATGTACTCGGCCACCAAATCTTTGCATTGTTACTGAGTTTATGTCTAGAGGAAGCTTATATGACTTTCTGCACAGACAAAAGGGTGTGTTTAAGCTTCCATCTTTACTAAAAGCAGCGATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACAGGGACCTCAAGACTGCCAATCTTCTGATGGATGAAAATGAATTGGTCAAGGTTGCCGATTTTGGGGTCGCTAGAGTGCAAACTCAGTCTGGAGTGATGACAGCTGAAACTGGAACATACCGCTGGATGGCTCCTGAGgtcattgaacacaaaccatatgatcagaaggcagatgttttcagttttggaatagcactttgggagcttttaaccGGAGAGCTGCCTTACTCTTACTTGACCCCATTACAAGCAGCAGTTGGTGTGGTGCAGAAGGGTCTACGACCTACAATTCCCAAAAATACACATCCAAGACTTTCTGAACTACTACAGCGGTGCTGGCAACAAGATCCAAAGGAGAGACCAGCTTTCTCTGAAATAATTGAAATTCTTCTGAACATAGCGAAAGAGGTGAATGATGACAAATTAGATCGACATAAAGATAAATCATCCCACGGTTTTCTCTCATCACTTAGGCGCGCTCATCACTGA 1731 0.3975 MVIEQDIESCGSRAVQSHPNPRHHRQKLEVYNEVLRRIQDSDCEEAHVPGFDDQLWLHFNRLPARYALDVNVERAEDVLAHKRLLKLAEDPANRPAFQVRLVQVYPFANANYIDSSVHSDTSEKEDAQSSLNYSLKQGIHPPPTFGSSSNLEALALQTNKNNIEDGDNAMGVTANFNRPMHEITFSTVDKPKLLSQLTLILGEIGLNIQEAHAFSTSDGFSLDVFVVEGWPNEETEELKGVLEKEIWKVKDQYLSNQGILYAFNDPNHTTMESSPPCIQIPSDGADVWEIDTSQLKYENKVGSGSFGDLFRGTYCSQDVAIKVLKPERISTDMLKEFAQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMSRGSLYDFLHRQKGVFKLPSLLKAAIDVSKGMNYLHQNNIIHRDLKTANLLMDENELVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYSYLTPLQAAVGVVQKGLRPTIPKNTHPRLSELLQRCWQQDPKERPAFSEIIEILLNIAKEVNDDKLDRHKDKSSHGFLSSLRRAHH 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00716 576 SUPERFAMILY Protein kinase-like (PK-like) 270 544 IPR011009 -
Car08g00716 576 CDD ACT_TyrKc 180 246 - -
Car08g00716 576 ProSiteProfiles Protein kinase domain profile. 295 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00716 576 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 15 562 - -
Car08g00716 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Car08g00716 576 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 15 562 - -
Car08g00716 576 Gene3D Phosphorylase Kinase; domain 1 285 373 - -
Car08g00716 576 Gene3D Transferase(Phosphotransferase) domain 1 374 571 - -
Car08g00716 576 PRINTS Tyrosine kinase catalytic domain signature 369 382 IPR001245 GO:0004672|GO:0006468
Car08g00716 576 PRINTS Tyrosine kinase catalytic domain signature 406 424 IPR001245 GO:0004672|GO:0006468
Car08g00716 576 PRINTS Tyrosine kinase catalytic domain signature 452 462 IPR001245 GO:0004672|GO:0006468
Car08g00716 576 PRINTS Tyrosine kinase catalytic domain signature 471 493 IPR001245 GO:0004672|GO:0006468
Car08g00716 576 PRINTS Tyrosine kinase catalytic domain signature 515 537 IPR001245 GO:0004672|GO:0006468
Car08g00716 576 ProSiteProfiles ACT domain profile. 182 256 IPR002912 -
Car08g00716 576 ProSitePatterns Protein kinases ATP-binding region signature. 301 322 IPR017441 GO:0005524
Car08g00716 576 Pfam Protein tyrosine and serine/threonine kinase 295 544 IPR001245 GO:0004672|GO:0006468
Car08g00716 576 SUPERFAMILY ACT-like 180 245 IPR045865 -
Car08g00716 576 CDD STKc_MAP3K-like 301 544 - -
Car08g00716 576 SMART serkin_6 295 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00716 Car-Chr8 6254189 6263844 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00716 2 575 MAP Kinase Kinase Kinase AT4G35780 70.069 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Car08g00716 PK_Tyr_Ser-Thr 4.5e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00716 - - gmx:100816767 1027.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01540 07 15179775 15180797 Car08g00716 08 6254189 6263844 PCT