Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00714 ATGTTCAATTTTTCGACAGTTGTGCATAATCCTCAACCTCACACACTCTTCTTCTCCTCCTTTCCTTCTTCTCCCACACCCCGCAAGTTCCAATCTTTTCAATCTCTCAAATTCCCCAGAATCTTCAACCTCCACAACTCCCTCTCCTCATCAAACCAAACCGACGACACCGAAGAACACGTCATTGGAGATTGTCTCGTTTTCGAAGAAGGCATTTTCGAAGACCCCATTTTTCCCAATTCTTCCGAAAACCTAGTAGACAACAAAACAAAAATCATTTCAAACAAAAAGAAGAAGAAAAAAGTTTCAGCTACTGAGTCCGAAAATTTGGTTCCTGATAAGTGGAGAGAAGTTCAAGCAGAGATAAACATAACGAAGAAAGAGAGGCGTAAGATAGCACAGGAAATTGAGTTCAATAGTAAGGTTTTGAAGAAGAAAAGAGGGTTGGTTCCTTTGAGGGATATGAATTTGAATGATTATAAGGCTTTTAAAGAAGCTAAATTGGCTCAGTTGAAACCTTTGGTTCTTGATAAGCCTCCAAGTTTTAGTTTTGCTGAGAATGAGAATGAGGAGGAAGAGATAGAAGGTAAATTGAGTGATGGGTCTGGTGATGAACGTGTTGAGGCTAGGAATCCTAGGTGGGCTGTTTATGGGAGAGGTTTGGAGGATGTTACTGAGTTTTTGAACAGTGAGAGTTATGATATTGCTGTTAAGGGAACTGAAGGTCGTCCTAAGTTGTTTACCAGAGAGGAGAAGGCTTTGTTGAGTAAGCGAAAGCCAGACTTGGCAGTTGCTACTTCAGATAAATGGCTTCCTCTCCACACACTTGCTGCAGGCGGGGAATTTTTCCTTGTAGAATCTTTGTTGAAGCACGACATTGATATTAATGTTATGGATAAGGATGGTTTGACTGCTCTTTACAAAGCGATAATTGGAAAAAAGCACGCCATAACCAATCATCTCCTGAGAAACTCAGCCAATCCCTTTGTACAAGATAATGACGGGGCCACATTGATGCACTATGCTGTACAAACGGCTTCGATCCCGACAATTAAAGTACTCTTGTTGTATAATGTCAATATAAATCTTCAGGATAATGATGGCTGGACACCATTACATCTTGCTGTTCAAACTCAGAGAACTGATGTAGTGAGGCTTCTGCTGATTAAAGGTGCTGATAAGACATTAAAAAACAAGGATGGTTTAACTCCACTTGACCTTTGCCTTTACTCTGGTCAAAGTGTCAGAATATATGAGATAATCAAGTTGTTGAAGCGGCCTCAAAGACGCGCTAGAAATGCGCAACAGATCGAGCAAAGAAACAATACATCTTTTGAAGATTTGGACTAA 1350 0.4037 MFNFSTVVHNPQPHTLFFSSFPSSPTPRKFQSFQSLKFPRIFNLHNSLSSSNQTDDTEEHVIGDCLVFEEGIFEDPIFPNSSENLVDNKTKIISNKKKKKKVSATESENLVPDKWREVQAEINITKKERRKIAQEIEFNSKVLKKKRGLVPLRDMNLNDYKAFKEAKLAQLKPLVLDKPPSFSFAENENEEEEIEGKLSDGSGDERVEARNPRWAVYGRGLEDVTEFLNSESYDIAVKGTEGRPKLFTREEKALLSKRKPDLAVATSDKWLPLHTLAAGGEFFLVESLLKHDIDINVMDKDGLTALYKAIIGKKHAITNHLLRNSANPFVQDNDGATLMHYAVQTASIPTIKVLLLYNVNINLQDNDGWTPLHLAVQTQRTDVVRLLLIKGADKTLKNKDGLTPLDLCLYSGQSVRIYEIIKLLKRPQRRARNAQQIEQRNNTSFEDLD 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00714 449 SUPERFAMILY Ankyrin repeat 253 423 IPR036770 -
Car08g00714 449 ProSiteProfiles Ankyrin repeat region circular profile. 334 366 - -
Car08g00714 449 PANTHER ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN, CHLOROPLASTIC-LIKE 23 427 - -
Car08g00714 449 Pfam Ankyrin repeats (many copies) 272 312 IPR002110 GO:0005515
Car08g00714 449 MobiDBLite consensus disorder prediction 185 205 - -
Car08g00714 449 ProSiteProfiles Ankyrin repeat profile. 268 300 IPR002110 GO:0005515
Car08g00714 449 ProSiteProfiles Ankyrin repeat region circular profile. 367 399 - -
Car08g00714 449 ProSiteProfiles Ankyrin repeat profile. 334 366 IPR002110 GO:0005515
Car08g00714 449 ProSiteProfiles Ankyrin repeat profile. 367 399 IPR002110 GO:0005515
Car08g00714 449 Gene3D - 238 339 IPR036770 -
Car08g00714 449 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 23 427 - -
Car08g00714 449 SMART ANK_2a 400 429 IPR002110 GO:0005515
Car08g00714 449 SMART ANK_2a 268 297 IPR002110 GO:0005515
Car08g00714 449 SMART ANK_2a 334 363 IPR002110 GO:0005515
Car08g00714 449 SMART ANK_2a 367 396 IPR002110 GO:0005515
Car08g00714 449 SMART ANK_2a 301 330 IPR002110 GO:0005515
Car08g00714 449 Gene3D - 340 448 IPR036770 -
Car08g00714 449 Pfam Ankyrin repeats (3 copies) 316 398 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00714 273 412 Ion Channels AT2G25600 31.429 9.94e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00714 - - mtr:MTR_5g022050 647.891