Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00712 ATGGCGGGCACCGGCGTTGACGGAAACGGTTTTACAAACCTCCATGGCGACCTCGACTTAACAATCATAGAAGCTCGCCGGTTACCTAACATGGATATAGTCTCCGAGCATTTCCGTCGCTGCATTACCGGCTGTGACACTATTAAATTCAAATCACCTTCCGAAAACGCCGACGGAAGTACCCACCGTACACACCGTTACCGGCGAAAGATCATAACGAGCGATCCGTACGTCACTGTTACGGTTCCGCAAGCAACCGTGGCACGCACGCGCGTGCTAAAAAACTCGCCGAATCCGATATGGAACGAACGATTCAACATTCCGTTAGCACATCAGATTGTCGATTTGGAATTCCGCGTCAAAGACGACGACGTTTTCGGCGCGGAAACGATGGGGACTGTCAAGATTCCGGCGCAGAGAATCGCATCTGGCGAATTGATTTCTGATTGGTTTCCTCTTATAGGTTCCTCCGGTAAGCCGCCGAAGCCGGACACCGCGCTTCGGTTACAAATGAAGTTCACACCGGTGGGCGAGAATTCTCTCTACCTCCGTGGTATTGCGGCGGATCCGGAACACAAAGGCGTGAGACACACGTATTTTCCTGTGAGGAAGGGAAGCTCTGTGAGACTTTACCAAGATGCACATTGTACTCCGGGATTGTTACCGGAGATTAAGCTTGACGGTGGAAAGGTTTTTAGACATGAAAAATGTTGGGAAGATATATGTTATGCTATATCAGAGGCTCATCATATGGTGTATTTGGCGGGTTGGTCAATTTACCATAAGATTAAGCTTGTTAGGGAACCTACTAGACCTTTGCCACGAGGTGGAGATTTAACACTTGGTGAATTGCTTAAGTACAAGTCTGAAGAAGGGGTTAGAGTTTTGATGCTTGTTTGGGATGATAAAACTTCCCATGACAAGATCTTCTTAAAGACGGCTGGAGTAATGCAGACTCATGATGAGGAAACTAGGAAGTTTTTCAAACATTCTTCTGTCATGTGTGTTTTAGCGCCTCGCTATGCCAGCAGCAAGATGAGCTTCTTGAAGCAACATGTTGTTGGAACCGTCTTCACACACCACCAAAAATGTGTTATCATGGACACACAGGCTGCTGGTAATAACAGAAAGATATCTGCTTTTATAGGAGGTCTTGATTTGTGTGATGGTCGCTATGACACACCTGAGCATCGACTTTTTCGTGATCTCGATACTGTATTTTCTGGTGATTTCCACAATCCTACATATCCTGCTGGGACAAGGGCTCCCAGACAACCATGGCATGATTTGCACTGCAGAATAGATGGACCTGCTGCATATGATGTTCTTATTAATTTTGAACAACGATGGAGAAAATCAACTAAGTGGAGAGAGTTTGCAATTCTTTTCAAAAAAGCTTCTCAGTGGAATGATGATGCTTTAATAAGAGTAGAACGCATTTCATGGATATTAAGTCCTTCTCTTCCTCCCACAAGGGAGGATCATACGATTGTTCCAGGGGATGATCCCTTGGTATGGGTTTCTAGTGAAGATGATCCTGAAAACTGGCATGTTCAGATCTTCCGCTCCATCGACTCAGGATCCCTAAAAGGATTTCCAAAACGTGTTGATACTGCTCTATCCATGAATCTCATCTGTGCTAAAAGTTTGGTTATAGACAAAAGCATTCAAACAGGGTACATTCAAGCTATCAGATCTGCTCAACATTTCATTTATATTGAAAACCAATACTTTATCGGATCTTCATATGCATGGCCATCTTACAAAGATGCAGGGGCTGATAATCTCATCCCAATGGAATTGGCGCTGAAAATTACTAGTAAAATCAGAGCTAAGGAGAGATTTGCTATTTATATTGTTTTACCAATGTGGCCAGAAGGTGATCCTAAATCTGGAGCTGTGCAAGAAATTCTCTTCTGGCAGGCCCAGACAATGCAAATGATGTATAGTGTTGTTGCTAAAGAATTGAAATCATCGCAACTTAGTGACGTGAACCCACAAGATTACCTCAATTTCTATTGCCTTGGTAAGCGGGAACACTTCAATGAAGAAAGCTCAGGCTCAAATGGTGCACCGATCTCTGGAGCATATAAATATCGCAGAAATATGATTTATGTGCATGCCAAGGGGATGATTGTGGATGATGAATATGTTATAGTGGGATCTGCTAACATAAACCAAAGATCTATGGCTGGTACTAAAGATACTGAGATAGCTATGGGTTCATATCAACCCCATTATACATGGTCTGCGAAGAAAAGACATCCACGTGGCCAGATTTATGGTTACAGAATGTCACTTTGGGCAGAGCATCTTGACATGTTAGATGAAACTTTTGAGGAACCAGAGAGATTGGAGTGTGTGCGTAAAGTGAATAAAATTGCAGAGAATAATTGGAGAATTTACGCATCTGAAGAATTGTCACTTCCTCAGGGACATCTTCTTAAGTATCCTGTACAAGTAGATTCTGATGGGAATATCAGCTCAATACCTGAATGTGAGAATTTCCCAGATGCTGGTGGTAAGATATTGGGGGCTCATTCTACAACAATTCCAGATATCTTAACAACATAA 2574 0.4316 MAGTGVDGNGFTNLHGDLDLTIIEARRLPNMDIVSEHFRRCITGCDTIKFKSPSENADGSTHRTHRYRRKIITSDPYVTVTVPQATVARTRVLKNSPNPIWNERFNIPLAHQIVDLEFRVKDDDVFGAETMGTVKIPAQRIASGELISDWFPLIGSSGKPPKPDTALRLQMKFTPVGENSLYLRGIAADPEHKGVRHTYFPVRKGSSVRLYQDAHCTPGLLPEIKLDGGKVFRHEKCWEDICYAISEAHHMVYLAGWSIYHKIKLVREPTRPLPRGGDLTLGELLKYKSEEGVRVLMLVWDDKTSHDKIFLKTAGVMQTHDEETRKFFKHSSVMCVLAPRYASSKMSFLKQHVVGTVFTHHQKCVIMDTQAAGNNRKISAFIGGLDLCDGRYDTPEHRLFRDLDTVFSGDFHNPTYPAGTRAPRQPWHDLHCRIDGPAAYDVLINFEQRWRKSTKWREFAILFKKASQWNDDALIRVERISWILSPSLPPTREDHTIVPGDDPLVWVSSEDDPENWHVQIFRSIDSGSLKGFPKRVDTALSMNLICAKSLVIDKSIQTGYIQAIRSAQHFIYIENQYFIGSSYAWPSYKDAGADNLIPMELALKITSKIRAKERFAIYIVLPMWPEGDPKSGAVQEILFWQAQTMQMMYSVVAKELKSSQLSDVNPQDYLNFYCLGKREHFNEESSGSNGAPISGAYKYRRNMIYVHAKGMIVDDEYVIVGSANINQRSMAGTKDTEIAMGSYQPHYTWSAKKRHPRGQIYGYRMSLWAEHLDMLDETFEEPERLECVRKVNKIAENNWRIYASEELSLPQGHLLKYPVQVDSDGNISSIPECENFPDAGGKILGAHSTTIPDILTT 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00712 857 ProSiteProfiles C2 domain profile. 1 151 IPR000008 -
Car08g00712 857 PANTHER PHOSPHOLIPASE D 12 857 IPR015679 -
Car08g00712 857 Pfam Phospholipase D C terminal 776 846 IPR024632 -
Car08g00712 857 SMART C2_3c 17 150 IPR000008 -
Car08g00712 857 Pfam Phospholipase D Active site motif 356 391 IPR001736 GO:0003824
Car08g00712 857 Pfam Phospholipase D Active site motif 702 729 IPR001736 GO:0003824
Car08g00712 857 Pfam C2 domain 16 153 IPR000008 -
Car08g00712 857 SUPERFAMILY Phospholipase D/nuclease 198 461 - -
Car08g00712 857 SMART pld_4 702 729 IPR001736 GO:0003824
Car08g00712 857 SMART pld_4 356 391 IPR001736 GO:0003824
Car08g00712 857 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 356 391 IPR001736 GO:0003824
Car08g00712 857 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 176 IPR035892 -
Car08g00712 857 CDD C2_plant_PLD 14 174 - -
Car08g00712 857 Gene3D C2 domain 14 184 IPR035892 -
Car08g00712 857 SUPERFAMILY Phospholipase D/nuclease 554 785 - -
Car08g00712 857 Gene3D Endonuclease Chain A 226 474 - -
Car08g00712 857 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 702 729 IPR001736 GO:0003824
Car08g00712 857 PIRSF PLD_plant 6 857 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Car08g00712 857 PANTHER PHOSPHOLIPASE D DELTA 12 857 - -
Car08g00712 857 Gene3D Endonuclease Chain A 529 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00712 Car-Chr8 6195318 6204210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00712 14 693 Phospholipase D Gene Family (Wang group) AT4G35790 70.657 0.0 1031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00712 K01115 - gmx:100801787 1511.12