Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00702 ATGGCTTTTTCTTTTAGCTCCTACCTAACCCACAATTCTCTATGTttgttaacattattattattattatttttaGCTTCACAATCAAAGAGGTGCCATGGTTTTAGTTCATTTGGTTTTGACATCCACCATCGATTTTCTGAACCGGTGAAGGGTATTTTGGGTATTCATGATGTACCCGACAAAGGAAGTCGTGAATACTATGTTGCTATGGCCCACAGAGACCGCGTGTTTCGTGGGAGACACCTCGCCGCCGATGATATTCATCAGAAACAGCTTCTTACGTTTTCTCCTGATAACGAGACGTACCAGATTAGCTTATTTGGATTTTTGCATTTTGCGAATGTTTCTGTTGGGACACCAGCTTCATCGTTTCTAGTTGCATTGGATACTGGGAGTGACTTGTTCTGGCTTCCTTGCAATTGTACCAAATGTGTGCATGGTATACAGTTATCATCAGGACAGCAAATTGATTTCAATATCTATAATAACAAAAGATCATCGACGAGCCAAATTGTTGGCTGCAACAACAGCTTATGTGAGCAGCAGAGTCAATGTTCTTCATCTAGTGCCACTTGTCCATATCAAGTTAACTATCTATCAGATGATACTTCAACTACTGGTTTCTTGGTACAAGATGTGTTGCACCTAATTACAGATAATGATTATCAAACTAAACATGTTGACCCACGAATTACTTTCGGTTGTGGACAAGTTCAGACAGGGGCATTTCTGGATGGGGCAGCTCCAGATGGTTTATTTGGACTAGGAATGGGTGATATATCTGTTCCAAGTATCTTAGCCAAACAAGGCCTAATTTCAAATTCATTTTCAATGTGTTTTGGTATTGATGGTTCTGGAAGAATAACATTTGGGGATGATAATAACAGCTTGGACCAAGGAAAAACACCATTCAACCTAAAGCCGTTGCATACAATTTACAACATCACAGTCACCCAAATTATTGTGGGAGGAAATGTTACTGATCTTGAGTTGAATGCAATATTTGACACTGGTACCTCATTTACATATCTAAACAACCCAGCTTATACGCAAATTACTCGAAGTTTTGATTCAAAAATTAAACTAAGCAGGCATTCATCTTCTGCTTCTGACAGTCTTCCATTTGAATACTGCTATGGAATTAGATCAAACCAGACTGTTGAAGTTCCAAATATTAATCTGACAATGAAAGGTGGAGACAATTATTTTGTCATAGACCCAATAGTATTGATTAGTGGTGGGGGTGCTAACAATGTTCTTTGTTTGGGTGTCTTGAAAAGCAACAATGTGAATATCATTGGACAAAACTTCATGACAGGTTACCGTATAGTCTTTGACCGCGAAATCAACATGCTGGGTTGGCAGGAATCTAACTGTTATGATGATGAAATCTTCAATTTACCGGTTAACCGATCAAACGCTCACGCCCCGGCTGTTGCTCCTGCTATGGCTGCAAATCCTAAAGTAACATCAAgtaaattcgcaaacttgatcactcaaactaatgcaacctGCTATTCATTGAGCTTAAACTACTATGAAAAAACATGCCATGATCTGGAGTATATTGTTGCCAAGGCAGTGAAAGATGCCGCTGCTAGGGACAAAACTGTTCCGGCAGCACTTCTGCGAATGCACTTCCATGATTGCTTTGTTCGAGGGTGTGATGCCTCTGTGCTGCTATATTCAAAAGGAAACAACAAAGCAGAAAAGGACGGACCGCCAAACATTTCTTTGCATGCATTTTATGTCATTGATGAAGCAAAGAGAGCAGTTGAAGCTAAATGTCCCGGTGTAGTTTCTTGTGCTGATATCCTTGCTCTAGCAGCAAGGGACGCAGTTTTTCTGGTAATAAAACAAAGCCAAGAACCAAAGTTCTCTTCATTGACATTCCTTTATTGTAAGTTTTAA 1914 0.3856 MAFSFSSYLTHNSLCLLTLLLLLFLASQSKRCHGFSSFGFDIHHRFSEPVKGILGIHDVPDKGSREYYVAMAHRDRVFRGRHLAADDIHQKQLLTFSPDNETYQISLFGFLHFANVSVGTPASSFLVALDTGSDLFWLPCNCTKCVHGIQLSSGQQIDFNIYNNKRSSTSQIVGCNNSLCEQQSQCSSSSATCPYQVNYLSDDTSTTGFLVQDVLHLITDNDYQTKHVDPRITFGCGQVQTGAFLDGAAPDGLFGLGMGDISVPSILAKQGLISNSFSMCFGIDGSGRITFGDDNNSLDQGKTPFNLKPLHTIYNITVTQIIVGGNVTDLELNAIFDTGTSFTYLNNPAYTQITRSFDSKIKLSRHSSSASDSLPFEYCYGIRSNQTVEVPNINLTMKGGDNYFVIDPIVLISGGGANNVLCLGVLKSNNVNIIGQNFMTGYRIVFDREINMLGWQESNCYDDEIFNLPVNRSNAHAPAVAPAMAANPKVTSSKFANLITQTNATCYSLSLNYYEKTCHDLEYIVAKAVKDAAARDKTVPAALLRMHFHDCFVRGCDASVLLYSKGNNKAEKDGPPNISLHAFYVIDEAKRAVEAKCPGVVSCADILALAARDAVFLVIKQSQEPKFSSLTFLYCKF 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00702 637 CDD pepsin_like 113 455 IPR034164 -
Car08g00702 637 PRINTS Plant peroxidase signature 600 610 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car08g00702 637 PRINTS Plant peroxidase signature 581 594 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car08g00702 637 PRINTS Plant peroxidase signature 542 562 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car08g00702 637 PRINTS Plant peroxidase signature 518 537 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car08g00702 637 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 10 483 - -
Car08g00702 637 Gene3D - 509 629 - -
Car08g00702 637 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 334 345 IPR001969 GO:0004190|GO:0006508
Car08g00702 637 Gene3D Acid Proteases 298 461 IPR021109 -
Car08g00702 637 ProSiteProfiles Plant heme peroxidase family profile. 508 637 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car08g00702 637 Pfam Peroxidase 526 617 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car08g00702 637 PRINTS Haem peroxidase superfamily signature 540 554 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car08g00702 637 PRINTS Haem peroxidase superfamily signature 601 618 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car08g00702 637 PANTHER ASPARTYL PROTEASES 10 483 IPR001461 GO:0004190|GO:0006508
Car08g00702 637 Pfam Xylanase inhibitor N-terminal 113 293 IPR032861 -
Car08g00702 637 ProSiteProfiles Peptidase family A1 domain profile. 112 456 IPR033121 -
Car08g00702 637 SUPERFAMILY Heme-dependent peroxidases 509 618 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car08g00702 637 Pfam Xylanase inhibitor C-terminal 314 456 IPR032799 -
Car08g00702 637 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 127 138 IPR001969 GO:0004190|GO:0006508
Car08g00702 637 Gene3D Acid Proteases 94 293 IPR021109 -
Car08g00702 637 SUPERFAMILY Acid proteases 106 461 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00702 Car-Chr8 6112406 6120601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00702 508 617 Peroxidase AT5G42180 74.545 2.60e-50 175
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00702 08 6112406 6120601 Car07g01638 07 16506612 16509787 PCT