Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00698 ATGACACTCAAAGGCTTTGTATCACTTGTCTTCAATTTATTTGGCCTAACAGAGGCACAAAGGAACAATGATGCAACTTTACCTTACCTTGTTTCTACTCCAATTGTCTCAAACAAGATCAAATCTGAATCGGCAACATCTTCAAATCTTATGGAGAAAAATAGTGAGGTTGGTTTGTGTAGTGTCTGTTTGTCGATGTTAAACGTCGACAAAGATGAAATTCGTGTACTTCCTTGTTTGCACGAATTTCATAAGGTTTGTGTAAATAAATGGCTAAAGGGTCATCATAAAACATGTCCATTGTGTCGTTTTTCAATGGGAGCTGAGGAAAAGTCTCATTGTGCTGAAATGTTCACTGATGAGATGCTAATATGGTTTTCTTCTTTCCATATTGCTGGTATGTGA 405 0.3679 MTLKGFVSLVFNLFGLTEAQRNNDATLPYLVSTPIVSNKIKSESATSSNLMEKNSEVGLCSVCLSMLNVDKDEIRVLPCLHEFHKVCVNKWLKGHHKTCPLCRFSMGAEEKSHCAEMFTDEMLIWFSSFHIAGM 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00698 134 PANTHER TARGET OF ERK KINASE MPK-1 8 119 - -
Car08g00698 134 ProSiteProfiles Zinc finger RING-type profile. 60 103 IPR001841 -
Car08g00698 134 Pfam Ring finger domain 60 103 IPR001841 -
Car08g00698 134 PANTHER GB|AAF27103.1 8 119 - -
Car08g00698 134 SUPERFAMILY RING/U-box 59 107 - -
Car08g00698 134 SMART ring_2 60 102 IPR001841 -
Car08g00698 134 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 108 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00698 Car-Chr8 6047264 6048019 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00698 60 103 C3H Transcription Factor Family AT5G45290 57.778 3.71e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00698 - - mtr:MTR_5g022770 196.438