Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00683 ATGGCTCAAGATGCAGAATATGTTAAGGAAATTCAGGAGGCTCGTGCTCAACTTGCTTCTCTTATCACCAATAAAAAATGTGCTCCTCTCATGCTTCGATTAGCATGGCACGATGCTGGTACTTACGATGCTAAAACAAGAACAGGAGGTCCCAATGGTTCTATAAGGAATCAACAAGAGCTTAATCATGATGCTAACAAGGGTTTGAAAACAGCTGTTGAATTATGTGAGGAAGTGAAGGTTAAACACCCAAAAATTTCATATGCCGACCTTTACCAATTAGCTGGTGTTGTAGCAGTAGAAGTCACTGGTGGTCCAACTATTCATTTTCTTCCTGGGAGAAAGGATTCATTGGAATCTCCACAAGAAGGTCGTCTTCCAGATGCCAAAAAGGGTGCATCGCATTTAAGGGACATTTTTTATCGTATGGGTCTAAATGATAGAGACATTGTAGCTCTATCCGGAGGACACACTTTGGGTAAGGCACATAAAGATCGTTCTGACTTTGAAGGTCAATGGACAAGAGACCCTAATAAGTTTGATAATTCCTATTTTGTGGAACTATTGAATTCAAAATCAAAAGAGTTATTGAAGCTTCCCACAGACAAGGCTCTAATTGAAGATTCTGTGTTCCGCAAGTATGTTGAACTTTATGCTAAGGATGAGGATGCTTTTTTCAGAGATTATGCAATCTCACACAAGAAACTGTCTGAATTAGGGTTCATTAATCCTAATTGCAATTATCGTTCTAAATTGGCCAAGGGAGTTATTGGATTTGCTATTGCCTCAACGGTTGTGATCCTCGGTTACTTACTAGAACTCAACAAAAAAATATATTGA 840 0.3893 MAQDAEYVKEIQEARAQLASLITNKKCAPLMLRLAWHDAGTYDAKTRTGGPNGSIRNQQELNHDANKGLKTAVELCEEVKVKHPKISYADLYQLAGVVAVEVTGGPTIHFLPGRKDSLESPQEGRLPDAKKGASHLRDIFYRMGLNDRDIVALSGGHTLGKAHKDRSDFEGQWTRDPNKFDNSYFVELLNSKSKELLKLPTDKALIEDSVFRKYVELYAKDEDAFFRDYAISHKKLSELGFINPNCNYRSKLAKGVIGFAIASTVVILGYLLELNKKIY 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00683 279 Pfam Peroxidase 15 221 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car08g00683 279 PANTHER L-ASCORBATE PEROXIDASE 5, PEROXISOMAL 3 274 - -
Car08g00683 279 ProSiteProfiles Plant heme peroxidase family profile. 69 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car08g00683 279 SUPERFAMILY Heme-dependent peroxidases 7 242 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car08g00683 279 Gene3D - 15 240 - -
Car08g00683 279 PRINTS Plant ascorbate peroxidase signature 7 27 IPR002207 GO:0004601|GO:0006979|GO:0020037
Car08g00683 279 PRINTS Plant ascorbate peroxidase signature 28 43 IPR002207 GO:0004601|GO:0006979|GO:0020037
Car08g00683 279 PRINTS Plant ascorbate peroxidase signature 46 56 IPR002207 GO:0004601|GO:0006979|GO:0020037
Car08g00683 279 PRINTS Plant ascorbate peroxidase signature 60 84 IPR002207 GO:0004601|GO:0006979|GO:0020037
Car08g00683 279 PRINTS Plant ascorbate peroxidase signature 85 103 IPR002207 GO:0004601|GO:0006979|GO:0020037
Car08g00683 279 PRINTS Plant ascorbate peroxidase signature 104 116 IPR002207 GO:0004601|GO:0006979|GO:0020037
Car08g00683 279 PRINTS Plant ascorbate peroxidase signature 125 142 IPR002207 GO:0004601|GO:0006979|GO:0020037
Car08g00683 279 PRINTS Plant ascorbate peroxidase signature 143 164 IPR002207 GO:0004601|GO:0006979|GO:0020037
Car08g00683 279 PRINTS Plant ascorbate peroxidase signature 165 189 IPR002207 GO:0004601|GO:0006979|GO:0020037
Car08g00683 279 PRINTS Plant ascorbate peroxidase signature 217 241 IPR002207 GO:0004601|GO:0006979|GO:0020037
Car08g00683 279 PRINTS Haem peroxidase superfamily signature 28 42 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car08g00683 279 PRINTS Haem peroxidase superfamily signature 86 103 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car08g00683 279 PRINTS Haem peroxidase superfamily signature 104 116 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car08g00683 279 PRINTS Haem peroxidase superfamily signature 149 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car08g00683 279 PRINTS Haem peroxidase superfamily signature 173 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car08g00683 279 ProSitePatterns Peroxidases proximal heme-ligand signature. 149 159 IPR019793 -
Car08g00683 279 Gene3D Peroxidase, domain 2 127 233 - -
Car08g00683 279 ProSitePatterns Peroxidases active site signature. 28 39 IPR019794 GO:0004601
Car08g00683 279 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 3 274 IPR044831 GO:0004601|GO:0034599
Car08g00683 279 CDD ascorbate_peroxidase 5 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00683 Car-Chr8 5951170 5952970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00683 32 240 Peroxidase AT4G17690 31.641 9.38e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00683 K00434 - gmx:100806101 452.981