Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00678 ATGGCTGTTTTGGGAAACTTGTTACCTCGTTTGGTATTTCTTCTTCTTCTTTTTGTTAGCTCAAGAGCAAAGGTTGTGACAATTGATGTACAAGAAGCCAAGAATCTAATCCAAGCTGGCTACATTTATCTTGATGTTAGGACGGTGGAAGAGTTTGTGAAAGGACATGTGGATGCTGCTAAGATCATTAACATTCCATATTTGTTGGGTGCACCCAAAAGCAGGGTGAAGAACCAAGATTTTCTAAAGGATGTTTCATCTGCTTGCAACAAAGAAGATCCTCTTATCGTGGGATGCCAAATTGGGGTGAGATCTCTGAATGCTTCTATTGATCTTCTAGCTGATGGTTTTAAGAATGTGAAGAACATGGAAGGAGGTTATGTGGAGTGGGTTAGAAACAACTTTCCAGTGAATACATCAGTAGTAGTCAAAGAAGAACTATAA 444 0.3919 MAVLGNLLPRLVFLLLLFVSSRAKVVTIDVQEAKNLIQAGYIYLDVRTVEEFVKGHVDAAKIINIPYLLGAPKSRVKNQDFLKDVSSACNKEDPLIVGCQIGVRSLNASIDLLADGFKNVKNMEGGYVEWVRNNFPVNTSVVVKEEL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00678 147 Pfam Rhodanese-like domain 31 132 IPR001763 -
Car08g00678 147 PANTHER THIOSULFATE SULFURTRANSFERASE 18 13 140 - -
Car08g00678 147 Gene3D - 17 138 IPR036873 -
Car08g00678 147 SMART rhod_4 28 136 IPR001763 -
Car08g00678 147 CDD RHOD 32 131 - -
Car08g00678 147 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 9 139 IPR036873 -
Car08g00678 147 PANTHER THIOSULFATE SULFURTRANSFERASE 18 13 140 IPR044684 GO:0003824
Car08g00678 147 ProSiteProfiles Rhodanese domain profile. 37 139 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00678 Car-Chr8 5910974 5912743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00678 24 139 Sulfurtransferasese or Rhodanese AT5G66170 56.034 1.77e-48 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00678 - K15692 gmx:100815122 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00678 08 5910974 5912743 Car07g01617 07 16271143 16273741 PCT