Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00677 ATGGTATCATTCCCTAGTAATTTTGTAGGTGAAAAATGGTTAGGATTTGTGACAGCAATATGGGTTCAAGCAATATGTGGAAACAATTATACATTTGCAAACTATTCAGATGTATTGAAGTCTCTAATGTCTTTGACACAGATGCAACTTAACAATCTCTCTGTTGTGAAAGATGTTGGTAAAGCTTTTGGTATATTATCAGGTCTTGTTTCTGATCGTTGGCCAACTTCAGTTATTCTCATGATTGGAGCTATTATGGGATTTATTGGCTATGGTGTTCAATGGCTTGTTGTTAGCCAAAGAATCACCCCTCTCCCTTATTGGCTGATGTGTGTATTCATGTGTATGGGAGGAAACAGCACAACATGGATGAACACAGCAGTACTAGTAACTTGCATGAGAAACTTCTCAAAAAACCGTGGTCCTATTTCTGGCATTCTTAAAGGCTATGTAGGACTCAGCACAGCAATCTTCACTGACATATGCACTGCTTTATTTTCCTCAGATCCATCTAAGTTTCTTTTAATGCTCACTATTGTTCCTGCTGTCATTTGTCTCATTGCTTCTCTTTTCCTTCATGAAACAAAATCAGCTTCAACTTCTATAGAAGAAAACCAAGAGACAAGATTCTTCAATGTGTTTAACTTGATTGCAGTTACTGTAGCTGTTTATCTCTTGGCTTTTGATGTCACTGGACCTCATGAACATGTTCTTTCATTGGTTTTCTCAATTGGACTTCTTGTTCTGTTAGCTATGCCACTTCTTGTTCCTTTGTATTTGGTCATGTTTAAAACTAGTACTACTTTTGACAGAGAAAAACAGACTCATGAACCATTGTTGGAAGAAAAGGTTTTAGATGAAAATGAAGAGAGATCTAAGGTGGAGGAAGTTGAGACGAAACGAAAACCGATGATAGGCGAAGAACATACCATCGTTGAAATGGCGAAAACTTTTGATTTTTGGATTCTGTTTGTGTCATTTCTTTGTGGTGTTGGAACAGGACTTTGTGTGATGAATAATATGGGACAAATGGGACTAGCACTTGGTTATAGTGATGTTTCTTTGTTCATTTCTTTCATTAGCATTTGGGGTTTCTTTGGACGCATTCTTTCTGGTTCACTCTCTGAATACTATATTAGAAAATCAGGCATGCCAAGGCTAGTTTGGAATGCTGCTGCTCAAATTTTAATGGTTTTTGGGTACATTGCATTAGCTATGGCCTTACCAGGATCACTATACATTGGTTCAATATTAGTAGGAATATGTTATGGAGTTCGTCTAACTATAACACCAGCAGCAGCTTCAGAACTATTTGGTCTCAAATACTATGGTTTATTATACAACATCCTAATTCTCAACCTTCCTATAGGTTCATTCATCTTTTCTGGTCTCATTGCTGGTTATCTTTATGATCTTGAAGCTACAAGTGTGCCAGGTGGAGGAAACACTTGTATTGGAGCTCATTGTTTCAGGCTTGTGTATGTCATTATGGCTTTTGCTTCTGTTTTGGGGTGTGGATTGGACTTGTTGCTTGTAGTTAGAACAAAAAAGGTATATTCCAAGATACAACTAGAGAGAACTCTTGTCAATTCTTAA 1596 0.3722 MVSFPSNFVGEKWLGFVTAIWVQAICGNNYTFANYSDVLKSLMSLTQMQLNNLSVVKDVGKAFGILSGLVSDRWPTSVILMIGAIMGFIGYGVQWLVVSQRITPLPYWLMCVFMCMGGNSTTWMNTAVLVTCMRNFSKNRGPISGILKGYVGLSTAIFTDICTALFSSDPSKFLLMLTIVPAVICLIASLFLHETKSASTSIEENQETRFFNVFNLIAVTVAVYLLAFDVTGPHEHVLSLVFSIGLLVLLAMPLLVPLYLVMFKTSTTFDREKQTHEPLLEEKVLDENEERSKVEEVETKRKPMIGEEHTIVEMAKTFDFWILFVSFLCGVGTGLCVMNNMGQMGLALGYSDVSLFISFISIWGFFGRILSGSLSEYYIRKSGMPRLVWNAAAQILMVFGYIALAMALPGSLYIGSILVGICYGVRLTITPAAASELFGLKYYGLLYNILILNLPIGSFIFSGLIAGYLYDLEATSVPGGGNTCIGAHCFRLVYVIMAFASVLGCGLDLLLVVRTKKVYSKIQLERTLVNS 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00677 531 Pfam Nodulin-like 12 258 IPR010658 -
Car08g00677 531 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 7 527 - -
Car08g00677 531 SUPERFAMILY MFS general substrate transporter 62 518 IPR036259 -
Car08g00677 531 CDD MFS_Mch1p_like 12 505 - -
Car08g00677 531 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 7 527 - -
Car08g00677 531 Gene3D MFS general substrate transporter like domains 12 206 IPR036259 -
Car08g00677 531 Gene3D MFS general substrate transporter like domains 313 521 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00677 Car-Chr8 5906689 5909768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00677 12 531 Nodulin-like Gene Family AT4G34950 61.609 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00677 - - cit:102624072 740.725